YALI0C04213g

Overview

Description similar to uniprot|P38333 Saccharomyces cerevisiae YBR247c ENP1 effects N-glycosylation
Locus type CDS
Locus tag YALI0C04213g

Location

Species Yarrowia lipolytica Positions 562812..564145
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1334 (nuc.)
Previous locus YALI0C04180g Next locus YALI0C04235g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C04213g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C04213gYALI0C04213g_mRNA-001YALI0C04213g_CDS-001

Nucleotide sequence

 

>YALI0C04213g
ATGGGAAAAGCTGATACTAAAGACGCCAAGGTGCGACACAGCCCGCTTCATGTCGACATG
AGCCAGGGCAGCGGACTTCTTCGAGAATCCGCCAAGCAGAAGACTTCCCGAAACACCAAG
AAGACCGATGCTGCAGAGGAGGATTTTATTGATTCGGCCACTTCGCGACGAATTCTGCAG
ATGGCACGGGATCAGCAGCGAGAGCTGGATGAGGAGGAGCGAGGCGAGGAGTTTCCCGAG
GATGACGATGTGGAATTCGAGGACGAAGACGAGGAGGAGGATGAGGAGGAGTACGAGGAG
TACGAGGATGTGCAACAGGAGTTTATGACCCCTGAGGATGCTGCTCTGTACGCGAAGTAC
TTCAATGAGGACGAGCCTGTTTCTCTGGCCGATAAGATCATGGCCAAGATTCGAGAGAAG
GAAGAGGAGGAGCAGTTTGAGCGAACTGGAGAGGCCCCTGGAACCTCCCAGGGTTTGGAG
GGAGAGGGAGTCATGCTTCCACCCAAGGTCATTGCAGTCTACGAGAAGGTCGGAGAGCTT
CTGAGCCGATACAAGTCTGGAAAGCTGCCCAAGGCATTCAAGATTGTGCCTACGCTGCGA
AACTGGCAGGATGTTCTGTACGTGACCGATCCTGCTAGCTGGTCTCCCAACGCAATCTAC
GAAGGAACAAAGATGTTTGTGTCCAACCAGCAGGCTAAGGAGGCCCAGAAGTTCATCCAG
ATTGTGCTGCTGGAGCGATTCAAGGAGGAGATTGAAGAGAAGAAGACCCTAAACTACCAC
GTTTATCGATCCCTGAAGAAGGCTCTGTATAAGCCTTCTGCCTTCTTCAAGGGTTTCCTG
TTCCCTTTGGCTGAGCAATGCACACTCAAGGAGGCCATCATTGTCAGCTCCATTCTGTCC
AAGGTCTCTATCCCCACTTTGCATTCTGCTGCTGCTCTCATGAGACTGGCTGAGATGCCT
TATTCCGGCCCCACTTCTCTGTTCATCAAGGTGCTGCTCGACAAGAAGTACGCTCTGCCC
TACCGAGTCGTTGACGCCGTGGTCTTCCATTTCATGCGTTTCGCTCACGTTGAAGAGGCT
CTCCCCGTCATCTGGCATCAGTCCCTTCTGGTCTTTGCCCAGCGATACAAGAGTGATATC
ACGGAGGATCAGCGAGACGCTCTTCTGGATGTCATCAAGGTCAAAAACCATCCCAAGATT
ACACCTGAAATTCGACGAGAATTGATTTCTGGCGAGTCTCGACCTATTGTGGATGAGCAG
ATGGAGGTTTAACTAACGGAAAAAGGACTATAATAGATGTATGTAGCATAATTAGAGATG
GTTGATTGGTATAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C04213g_CDS-001

Protein length: 424 aa.
Product: Protein associated with U3 and U14 snoRNAs, putative

>YALI0C04213g_CDS-001 MGKADTKDAKVRHSPLHVDMSQGSGLLRESAKQKTSRNTKKTDAAEEDFIDSATSRRILQ
MARDQQRELDEEERGEEFPEDDDVEFEDEDEEEDEEEYEEYEDVQQEFMTPEDAALYAKY
FNEDEPVSLADKIMAKIREKEEEEQFERTGEAPGTSQGLEGEGVMLPPKVIAVYEKVGEL
LSRYKSGKLPKAFKIVPTLRNWQDVLYVTDPASWSPNAIYEGTKMFVSNQQAKEAQKFIQ
IVLLERFKEEIEEKKTLNYHVYRSLKKALYKPSAFFKGFLFPLAEQCTLKEAIIVSSILS
KVSIPTLHSAAALMRLAEMPYSGPTSLFIKVLLDKKYALPYRVVDAVVFHFMRFAHVEEA
LPVIWHQSLLVFAQRYKSDITEDQRDALLDVIKVKNHPKITPEIRRELISGESRPIVDEQ
MEV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG