YALI0C03135g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0C03135g

Location

Species Yarrowia lipolytica Positions 420714..423681
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 2968 (nuc.)
Previous locus YALI0C03115r Next locus YALI0C03157r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C03135g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C03135gYALI0C03135g_mRNA-001YALI0C03135g_CDS-001

Nucleotide sequence

 

>YALI0C03135g
ATGGACTCAGAGCGGTTCTTGACTAATCCAAAAACCAGAACGGCCACACCGGCCCCGGGG
GCCCGAAGAACCCGCATTCCCACTCCTATCCGCATCCAGGGCAAGCCAGGCATGTCTACA
GCAACATCAACGTCGTCGACCGGCAGAACCACGCCTTCAGGACGCATCACACCGGTACCC
AAGGGAAGTGGGATTCCGTACAGAGTGGATACGAGGGACCCTGATCGGACCGCGAGTCGA
GCAGCGAGTCGGGCATCGAGTCTGACTCTGGCTGGCGTCAAGACCAGACCGACGAGAGCA
GCGACTCCCATGGCCATGACTCGACCTGGCGAATTCAGACCCGGAGGAGGATTAAGGAAG
GGAGGAAGTCGAGTGACGAGCAAATCTGGACGCAGTTTCTCCATGCCCACAAGGCCACAT
TGCGAGACTATGGATCAGGTGGAAGTGGAGCAGGTTGGGAGAGTTGAGGAGGTGACGCGG
GTGCAACTGGAGGAAGTCAAGAAGTTGAACGTCCTAGAGGTCAAGGTGGAAAAGGAGGAG
GTTGGGCACACAAATGAGCATATGTCTCGCCACATCGTCCCACCAGACATGCCCACTCAT
ATGACACATACTCCTCCCCCGGAGGACACATCTGTGGACTCTTTTGTCTCTGCACCAGAA
GAACCAAGAAGTTATAGCATGGGCGATTTGCTGACGTCTCACCAAATGCTGACACGTGAC
CGCAACGACTCTACAACCTCTCTGCAGCGAGAAAATCCCATTTCCCGACGACACTCGCTG
ACTGTTTCTCTCACCGAAACAGACTCGGAAACCGTGCTACTAAGACAACAGTTCAAAACA
GTGGCTATAGAGACCGTCACGGGTGGCGAGCCACGTGACCCGACCATCCACGATACCCTG
GTCACATGTTCGCCTGATCATGTGATTGTCAGCACCGGCTCGAACCACATGACTTATCCC
ACCTGTCTTTACACCTGGACTTTGGTGGACCAGAAGCTGAGTAACCCGTACCTGCTCCGT
CACAAGCTCAAGTATGCGCTTGTAGCCATTCCCATCCCAGTTTCTGGTATGCCCAATCTC
TCTCGGTCAGTTTCTCGTGTGTCGTTGGAGTCGTCACGAACATCTATCATCTCTGTGGAT
GATTCAGAGAAACGACGGAGCAGTTTTGGACGACTCAAGAGTCTGTTGAGAAAGAAGGAT
AAGGAGGTGATTGCTAAGCCATACACGCCGTCGTCACGTGATAAGCCCGAGTACTCTCTG
GTGTTGTTGTTTGACTCCAAGGCTTCTCAGCAAATGTGGAAGGAGAAGTTGGGGTATATG
CTTGAAGGAGATGCTCAAAACCGTCTTCCTCCTGTAATGACTCGTCATAGACCTCACACG
CCTCCTCAGGACGAAGATCTGGGTTTCAAGGTCGACCGAGACAGACTGCGGAGTTATATG
GATGTTGGAGGGTGGAGTAAGTTGGTTCGAAAGAGAGACAGTGTGATTGAGACATCCGAT
AAGAGCGAAAAGAGAGATAGTAAGGGAACAGGGTCGTTGAGAAAGTCGAGGAGCTTCAAA
AACTTCCGTGAAAGTTTTTACTCCTCGAAAACCGTCGACTTGGAGGAACCAGACACTACT
GAAGCAAGGGATGATGCCAAGGACACAAGGGCACCTAAAAAGGAGTCTAGTGGGGAGGAA
GAAAAACATGGAGATGGAGATTACCCATGTTTAGAAGATGCCCAGGAAAGATTTTCGACC
CCCTTGGAGAATGTTCCTGCTGACGAAGGGGCTTCTGTTTCCGTCATTTCTGCTGCTTCG
GATGAACAGACAACATTGAACGACATGTTTCGAAGCGATGAGTTCTACCGACAGTCTACG
TCGTCGCTATCACAGGATACCGATTTACGTGACTCGTCGCACCTTGAGGTGGACCTCTCA
CGTGACGTTACACTCAAGCGGCGACCCCAGGGTATTGTGATGGCTCGGGAAGTGTCTGAG
GGCACTGTTAGAGAAGGAGAGACATATGATCAGCTGCAGCAATTGAAGCGGACCTCACGT
GAGTCACATGGACACGATCCATTATCACGTGACTCATTCTCATATGATATTCAGCGTCAC
GACTGTCTTCCACGAGAGAGTCCCACTCATGAGAGTCCCCAGGATGAGTGGACTCGGCTT
TCTACTTATACCCTCAACACCACCAACTCAAGCTGTCCAATCACTCCTGTGACGCCTGTG
TTGGATGTCAACCACGTGAGCCCCGTGATTGCCTTCTCTGCTAACACAACTCCTCCCATC
AACATGCTCCACACTGTTCCCAGCAATGTCAGCACTGCTAAGAGTGTCAGTAACCATCAC
CACTTGACATACTCGGACCACATGGGTTATTCTGACCACGTCCCGCATGTTCCACCCCTT
AAGACCCCGCTGTGGTTGCCAGGTCACAGCAGGGCCAAGAGTGATATTCGAGCTGCTCTT
GCGCGAGATCGAGGAGGAAGCAGCACTCCCGTGACCCCCATGGCTTCCACCGCCGACCTA
TTGTCTCTGACTCGCGATCGGTCCAGTAACGATATGGTGTCTCTAAAGTCGCGCGAATTC
CAGCTCAAAAACACCACTGTTCGTCCTCGGCTTCATAAGACGGTTTCCAACCCTTGCCTG
GTGGACGCAACTGACGAAGCTGAAAAGATGAACAAAATCAGTTCGGAGGCCGCTCGTCTG
TGGCTCAAGCGACGCCAGAGCGTCTCATCCATCTCCTTGGCCCCTCCTGTGTCTCTGCAG
CAGCTGGTCAAGGAGCCAGCAGTCCGAAAAATGACCAAAAATGTCTACAACGGCCAGCTT
CCTGGCTGGCATGCCTTGTCTCAGGCAAGCAGTAGAGTCCCTGGGGTTCCTGTCCCCAAG
GCATAACTAGCTAACAACTAACAACCACTGAGCATCATTCCTAGCTCGTATGGCCTATTT
AATATAACGATCTGATGATATTTAACTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C03135g_CDS-001

Protein length: 962 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0C03135g_CDS-001 MDSERFLTNPKTRTATPAPGARRTRIPTPIRIQGKPGMSTATSTSSTGRTTPSGRITPVP
KGSGIPYRVDTRDPDRTASRAASRASSLTLAGVKTRPTRAATPMAMTRPGEFRPGGGLRK
GGSRVTSKSGRSFSMPTRPHCETMDQVEVEQVGRVEEVTRVQLEEVKKLNVLEVKVEKEE
VGHTNEHMSRHIVPPDMPTHMTHTPPPEDTSVDSFVSAPEEPRSYSMGDLLTSHQMLTRD
RNDSTTSLQRENPISRRHSLTVSLTETDSETVLLRQQFKTVAIETVTGGEPRDPTIHDTL
VTCSPDHVIVSTGSNHMTYPTCLYTWTLVDQKLSNPYLLRHKLKYALVAIPIPVSGMPNL
SRSVSRVSLESSRTSIISVDDSEKRRSSFGRLKSLLRKKDKEVIAKPYTPSSRDKPEYSL
VLLFDSKASQQMWKEKLGYMLEGDAQNRLPPVMTRHRPHTPPQDEDLGFKVDRDRLRSYM
DVGGWSKLVRKRDSVIETSDKSEKRDSKGTGSLRKSRSFKNFRESFYSSKTVDLEEPDTT
EARDDAKDTRAPKKESSGEEEKHGDGDYPCLEDAQERFSTPLENVPADEGASVSVISAAS
DEQTTLNDMFRSDEFYRQSTSSLSQDTDLRDSSHLEVDLSRDVTLKRRPQGIVMAREVSE
GTVREGETYDQLQQLKRTSRESHGHDPLSRDSFSYDIQRHDCLPRESPTHESPQDEWTRL
STYTLNTTNSSCPITPVTPVLDVNHVSPVIAFSANTTPPINMLHTVPSNVSTAKSVSNHH
HLTYSDHMGYSDHVPHVPPLKTPLWLPGHSRAKSDIRAALARDRGGSSTPVTPMASTADL
LSLTRDRSSNDMVSLKSREFQLKNTTVRPRLHKTVSNPCLVDATDEAEKMNKISSEAARL
WLKRRQSVSSISLAPPVSLQQLVKEPAVRKMTKNVYNGQLPGWHALSQASSRVPGVPVPK
A*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG