YALI0C02959g

Overview

Description similar to uniprot|P35197 Saccharomyces cerevisiae YDL226C GCS1 (ohnolog of YNL204C) ADP-ribosylation factor GTPase activating protein (ARF GAP), involved in ER-Golgi transport
Locus type CDS
Locus tag YALI0C02959g

Location

Species Yarrowia lipolytica Positions 397970..399387
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1418 (nuc.)
Previous locus YALI0C02937g Next locus YALI0C02981g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C02959g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C02959gYALI0C02959g_mRNA-001YALI0C02959g_CDS-001

Nucleotide sequence

 

>YALI0C02959g
ATGCCCAACTGGACTGTGGATCCTGCCAACAAAAAACGGCTTCTGGCGCTGCAGAAGGAC
GGTGCCAACAAAAAATGTTTTGACTGTGATGCCCCCAACCCGCAATGGGCCTCCCCCAAG
TACGGCATCTTCATCTGCCTGGAGTGCGCCGGAGTGCACAGAGGTCTGGGAGTGCATATC
TCGTTTGTGCGATCTATCTCGATGGATCAGTTCAAGCCCGACGAGATGGAGCGGATGGAG
AAAGGTGGCAACCAGCGGGCCCACGAGTTTTTCGACAAGGCCGGTATGGCCAGAGATACT
CCCATCAAGCAAAAGTACAACTCGGTGGTGGCTCGAAATTACATGAACTACCTAACCAGT
GAGATCGAGGGCACCGAGTACGTCCCCGAGAAGGAGGGTGCCACCCCCAGTGTTGCCCCC
TCCAAGTCACGTGACTCCAGTCGATCTGGCGAGTCCGATCTGACTCCCCAGGGCTCTAAC
GTGGCCTTTTTCGAGGGTCTGGGTGCTAAGAACGCATCTCGATCTGCTGACGTTCGACCT
TCGGAGGGCGGCAAGTACTCCGGATTTGGCAACACTCCCGCTCCCGTCTCGTCCAACAAC
CGACCCGGTGCCACCATCACGATGGACAACTTCCAGGCCGATCCTCTGGGCACTCTGACC
AAGGGCTGGGGTCTATTTTCCAAGACCGTCAGCCAGATGTCGACTGAAGTCAACAACCAG
TACATTAAGCCTACTGTCCAGAACATCCAGGAGTCCGAGTACACAAAGACTGCTTTGGAG
CACGCACAGAAGCTGGGAGAAACCGTTCAGAAGGAGAGTAAACGGGGTCTGGACCGGTTC
CACGAGTTCGTGGAGGGCAACGAGGGCGATCCCCAGGGCTACAGCCGACCCGGCGAGTCG
CGAAACCTGATCCAGTACGAGGACGAGTCCGATGAGGATCCCTTTTCTCATCTCAAACCC
AAGGGTAAATCCAACATGACTGGATTCGGAAAGACTGCCGACGGTGAGGACTGGGGCGAA
TGGAACGAGTGGGACGACGATGGAGTGGAGGACGAGGACGAGGACGAGCAGGTGGCCAAG
GTCACCAAGGACGCTGTTCCCCCTGCTGCTGCTCCTTCGGCTACTGAGGCCCCCAAGGCG
AAGAAGCCCTCTGCCAAGGAGCGAGCTCTGGCTGCCAAGGCTGAGGCCGAGAAGGCTGCC
AAGGAGGCTGAGGCAAAGGAGAAGACTGAGAAGGTTGATGGAGCCGAGGAAAAGGAGGCT
GAGAAGGTCGAGGAGCAAGACAAGGAGCCTCTTGAGGAGGTTGAGCCCGAGGCTGAGCCC
GAGATGGAGCCCAAGTCTAAGAAGGATGATTAGATGTATTATAGATAGAATAAGCGTTGT
ATACAACTGTGTAGGGGGTCAATGTTGCTGTGGTTCTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C02959g_CDS-001

Protein length: 451 aa.
Product: ADP-ribosylation factor GTPase activating protein (ARF GAP), putative

>YALI0C02959g_CDS-001 MPNWTVDPANKKRLLALQKDGANKKCFDCDAPNPQWASPKYGIFICLECAGVHRGLGVHI
SFVRSISMDQFKPDEMERMEKGGNQRAHEFFDKAGMARDTPIKQKYNSVVARNYMNYLTS
EIEGTEYVPEKEGATPSVAPSKSRDSSRSGESDLTPQGSNVAFFEGLGAKNASRSADVRP
SEGGKYSGFGNTPAPVSSNNRPGATITMDNFQADPLGTLTKGWGLFSKTVSQMSTEVNNQ
YIKPTVQNIQESEYTKTALEHAQKLGETVQKESKRGLDRFHEFVEGNEGDPQGYSRPGES
RNLIQYEDESDEDPFSHLKPKGKSNMTGFGKTADGEDWGEWNEWDDDGVEDEDEDEQVAK
VTKDAVPPAAAPSATEAPKAKKPSAKERALAAKAEAEKAAKEAEAKEKTEKVDGAEEKEA
EKVEEQDKEPLEEVEPEAEPEMEPKSKKDD*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG