YALI0C02849g

Overview

Description some similarities with uniprot|P38757 Saccharomyces cerevisiae YHR004c NEM1 required for nuclear morphology
Locus type CDS
Locus tag YALI0C02849g

Location

Species Yarrowia lipolytica Positions 392003..393553
Strain CLIB 122 Strand Sense
Chromosome YALI0C Total length 1551 (nuc.)
Previous locus YALI0C02827g Next locus YALI0C02871g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C02849g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C02849gYALI0C02849g_mRNA-001YALI0C02849g_CDS-001

Nucleotide sequence

 

>YALI0C02849g
ATGAACTCACTTCAGTTTCTGTCAGAACAGGTCGACAAGGTGATTTCTCGCTCGTCCAAG
GCGTCACAGCGCCTGGGAGACGGAGGCGAAGGGGTGGCTCGAACGCACAGCCTGGTCGAC
ATGTCTAAGGAGGATACAGATGAGCTTGATTCCCGTAAGCGGCCACTGATCCAGCGATCC
CAGACCATGGACGCTTACACGGGCATGGGACCGCAGGACTCGGGCTACGACGGACTATTT
CGACGCCCGTTCGAGGACATTGAGAGCTTGGCTAGCACGATTCGACGGATCGGAAGCTTC
GTGGTAGGTAGTGGAGGAGAGCAACCAGCGGAGCAAGCAGGGGCTGAGACAGGTGCTTCT
CAGACCACGGTATCGGAAAAGCCACTGGTAACCACTCCTGGTACAGTGACTCCCAAGAAC
TCGGGCACTCCTGAAAGTGCTGGTCTTCATACTCCGTTTTCTGACGGAGAGGTTTCCTTC
TCTGAATCCGAAAAGAAGTTTTCCATGAAGCCCTCCTCAAAGAGGGATTCATCACAAACC
ACAACGGTGCCACCACAAACATCTACAATCTACTATATCATCACTTTATCCTTCATCTGG
GACACTCTTCGGTTCCTGTATTCTCCAAGTGACTTTCTGGTTCGGGTCTTTCGAAACGAG
CCCGATGAGCGACCCCGGGTATCGCCTGCAACCACTGCGGTCTCACGACACACTTCTCCT
CGGTTAACACCCGAGACAGACACAGAGGCGGCTCCTGTTCGGGACCATCAGAGTCCCACC
TCAGGTGCTGTTGCTCGTCGCAAGAACAGAAAAGCCAAGTTCCGATACCCAAAGTCGCTT
CTGCATCCAGTGAGAGCAAACAGTAAGACTCTGATCCTGGATCTCGACGAAACCCTCATC
CATTCCCAGTCTCGTGGAAAGCCCTCAATGATGGGCCACATGGTTGAAGTACGACTGGAC
AAGCGACATGCCACCTTGTACTACGTGCACAAGCGCCCATTTTGCGACGACTTTCTCAAG
CTCGTGTGCAAGTGGTACAACGTGGTTGTGTTCACGGCATCGGTGCAGGAGTATGCCGAC
CCTGTGATCGACTGGCTGGAGCAGGAGCAGCGATTCTTTTCCAAGCGGTACTACCGACAG
CACTGCACCAAGGTTGGAAACGGATATGTCAAGGATCTAACATGCGTGGACAAGGATCTG
AGCAAATTGCTAATTATCGACAACTCACCCATCAGCTACATGATGCATGAAAACAATGCC
ATTGCCATTGAGGGCTGGATCAACGATCCTACAGACGTGGATTTGCTATGTCTGTTGCCT
GTGTTGAATGCCTTGAGGTACTGTATTGATGTCAGACAAGCCATCACTCTGAGATTAGGC
GATGGAGCTTTTGAGTAAGCCCTAGCACTGCTCAGGTACATGGCGTCCAATAACTGCAGT
CTACGAACACGTTCTTTACTCAAGAACAATTGAAACTATCAACTAGTCTCATGTTATAAC
CAAGGCTATCAACTAGCCATGTACATATTTATTAAATCAGTTATAGTGAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C02849g_CDS-001

Protein length: 466 aa.
Product: Conserved hypothetical protein

>YALI0C02849g_CDS-001 MNSLQFLSEQVDKVISRSSKASQRLGDGGEGVARTHSLVDMSKEDTDELDSRKRPLIQRS
QTMDAYTGMGPQDSGYDGLFRRPFEDIESLASTIRRIGSFVVGSGGEQPAEQAGAETGAS
QTTVSEKPLVTTPGTVTPKNSGTPESAGLHTPFSDGEVSFSESEKKFSMKPSSKRDSSQT
TTVPPQTSTIYYIITLSFIWDTLRFLYSPSDFLVRVFRNEPDERPRVSPATTAVSRHTSP
RLTPETDTEAAPVRDHQSPTSGAVARRKNRKAKFRYPKSLLHPVRANSKTLILDLDETLI
HSQSRGKPSMMGHMVEVRLDKRHATLYYVHKRPFCDDFLKLVCKWYNVVVFTASVQEYAD
PVIDWLEQEQRFFSKRYYRQHCTKVGNGYVKDLTCVDKDLSKLLIIDNSPISYMMHENNA
IAIEGWINDPTDVDLLCLLPVLNALRYCIDVRQAITLRLGDGAFE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG