YALI0C02717g

Overview

Description weakly similar to uniprot|P25037 Saccharomyces cerevisiae YDL122w UBP1 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins
Locus type CDS
Locus tag YALI0C02717g

Location

Species Yarrowia lipolytica Positions 376176..378007
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1832 (nuc.)
Previous locus YALI0C02673r Next locus YALI0C02732r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C02717g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C02717gYALI0C02717g_mRNA-001YALI0C02717g_CDS-001

Nucleotide sequence

 

>YALI0C02717g
ATGTTGACACAGGGAATGAGAGGATACTACCGTGGAATGGGAGGAGGCAAGAACGGTCAG
GTGACCGTGGGTGGGCTGGAGAATGACTCGGCCTTTTGTTTCATGAACTCCGTGCTCCAG
TCCATGGCTTCTCTTGATCGGCTGGACGAGTTTTTGGGAGGAACTCAGTACGAAGGCGTG
GAACTCGATACTACTACCCGCAAGCGGTATGAAGAGAGTGAGAACGAGGATGACAGCGAC
GAGGGCGCCGAGAACGGGCCTGAGGGTCCTGTTTCTGAGGCTGAGACGGAGATTGACCAG
GTCCCTGACCGGACCCAGCCTACTGTGCCTGAAGGAGCTTCTGCAGTCCCTGAAGCTGAA
GACGATCTGGTAGAGGTGAATGCTGTGGCTGAGGAGGAGGAACAGGAGGAGGAGCTCAAA
CAACCCTCGGCTCTGGAGCTATCTTCTTTGATTCCCGGTTTCCCCGCCCAACCTGAGAAG
GCTGATCCCGAGGAAGTGACCGAGGTAACTGAAACGTCGACTACGGTTCAGAATCCTATC
TGTCCGTCGTCGCTCGAGTCATTCCACTCATCCACCGGACTCGGAGCCTTTTCCTACGAG
CTCAAACGAATGTTTGCTCAGCTCAACACCCTCTCCAACAGATCGCACACCTACTCGGGT
CTGCCCATCACACGAGCCATGGGCAAGAGCGGCCAGCGATGGGACGGATATGAACAGGAG
GACGCTGGCGAGTTTTTCCAGCAGCTTATCGACAGGCTGGAAAACGAGGTCAAGGCCAAG
GCTGGAGGAGCAGACAAGGTTGAGGAGAAGACTATCTCTGAAGACACTTCCGCGCTCGAC
AAATGGAAGAAGAAAATGCTCATTCCGTTCGACGGAGTCCAAGCAACCACCATCAAGTGT
CTCACATGTGGAGACCTCGGTGACGGCATTCGATACAACATCATGGGAGCTCTGGGTCTG
TCTCTCCCCAACCAGACCTCTCGGTTCTCCCGATCCACTCACACTCTCAAGGAATGCATT
GACATGTTTGCTGAGCGGGAGATTATTGATGGTGTGAGCTGTGAACGATGCTCGTTGCAG
GAATATAAGAGACAGGTGGAGGACCAAATCAGCAAGGTTGCAGACACAGCATCACCTCTG
GTGCAACTGTTTCAGACCAGACTCGATAAGGTCGACACTGCTCTGTCACGTGACACCATT
AACGAGGAGGAGTACAACGATATCTTCAAAAAGAACACCGGCGGCTTTGCCAAGGTGTTT
GTTCAAAAGTCCAAGCAGACTCTCATTGGGGTAGCCCCTCAGATTTTGTGTGTGACCATC
AACCGGTCGCAGTTTGACATGAACACTGGTATGAGTTTCAAGAACTCGGCTAATGTGCGG
TTCCCGTCTCTGCTGTGTCTGGACGAGTGGATGGACGACAAGTCGCAGACCAAAAAGATG
TACCGGCTCAAGTCCGTCGTGTCGCACTACGGATCACATGACTACGGACACTACATTGCG
TATAGACTGTCTCGAGACAAGTGGTGGCGTATTTCTGACGAGACTGTTTACCAGACCGAG
CTCTCATACGTGCTGTCTGATGGTTCCATCTTCATGCTTTTCTACGAACTGGCTGCCCCG
GAAGAAGCCGAGGAGCTGTACACTCAGATGATTGAGGAGCAGAAGGAGCAGCAGAGTCAT
GGATCTGGAGCTGTAGATAGCAGTGAGGAGGACGAGAGTGATGAGGAGGACGAAAGTGAG
GCCGACAAAGAGGAGGAGAGCGAAGACGAAGATATGGAGTAGAAGCGAGCACGATCACGG
ATGTAATTAGAATGTATATGATTGGTGGTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C02717g_CDS-001

Protein length: 594 aa.
Product: Conserved hypothetical protein

>YALI0C02717g_CDS-001 MLTQGMRGYYRGMGGGKNGQVTVGGLENDSAFCFMNSVLQSMASLDRLDEFLGGTQYEGV
ELDTTTRKRYEESENEDDSDEGAENGPEGPVSEAETEIDQVPDRTQPTVPEGASAVPEAE
DDLVEVNAVAEEEEQEEELKQPSALELSSLIPGFPAQPEKADPEEVTEVTETSTTVQNPI
CPSSLESFHSSTGLGAFSYELKRMFAQLNTLSNRSHTYSGLPITRAMGKSGQRWDGYEQE
DAGEFFQQLIDRLENEVKAKAGGADKVEEKTISEDTSALDKWKKKMLIPFDGVQATTIKC
LTCGDLGDGIRYNIMGALGLSLPNQTSRFSRSTHTLKECIDMFAEREIIDGVSCERCSLQ
EYKRQVEDQISKVADTASPLVQLFQTRLDKVDTALSRDTINEEEYNDIFKKNTGGFAKVF
VQKSKQTLIGVAPQILCVTINRSQFDMNTGMSFKNSANVRFPSLLCLDEWMDDKSQTKKM
YRLKSVVSHYGSHDYGHYIAYRLSRDKWWRISDETVYQTELSYVLSDGSIFMLFYELAAP
EEAEELYTQMIEEQKEQQSHGSGAVDSSEEDESDEEDESEADKEEESEDEDME*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG