YALI0C02563g

Overview

Description similar to uniprot|Q05959 Kluyveromyces lactis KLLA0D13640g SUA7 Transcription initiation factor IIB (General transcription factor TFIIB)
Locus type CDS
Locus tag YALI0C02563g

Location

Species Yarrowia lipolytica Positions 357597..358799
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1203 (nuc.)
Previous locus YALI0C02541g Next locus YALI0C02585g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C02563g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C02563gYALI0C02563g_mRNA-001YALI0C02563g_CDS-001

Nucleotide sequence

 

>YALI0C02563g
ATGTCCTTCCAACAAAACCTCAACGTGACACTCATGTGTCCCGAGTGCAAAATCCTGCCA
CCAGACATTGTGGAACGGTTCGCGGAGGGAGACATGGTCTGTGGCCAGTGTGGTCTGGTC
CTCTCTGACCGAGTGGTTGATACCCGGTCTGAATGGAGAACCTTCTCCAACGACGACCAG
GGCTCCGACGACCCCTCGCGAGTGGGAGACGCCATGAACCCTCTGCTGGAGGGCTCCCAG
CTCAACACGATAATCTCGTTTGGAGCTCCGGGCTCGTCGGTCGGCAGAGACCTCAACCGA
ACCCAGTCGCGGTCTCTGCAGGACAAGAAGGACGCGGCTCTGTCAGCCGTGTATGCCAAG
ATTTCCCAGATCTGCGACGGTATTTCGCTACCCCGAGTGGTGTCCGACGCCGCCAAGGAG
GTCTACAAGCTGGTTCATGACGACAAGCGACTGCGGGGAAAAACCCCCGACGCCATCATC
GCCACCGTCATTTTCATCGCTTGTAGACACGCCAACGTGCAGCGAACCTTCCAGGAAATC
GGAGCTCTGACCAACGTGTCCAAGAAGGAGATTCGACGAACTCTAGAGCTCATGAAACGG
CTGCTCGAGGGAACCAATATCCAGGCGTTCCGATCCACCCAGACCAACCCCGGTGCTCTT
ATGCCCCGATACTGTTCCCATCTGGGACTCAATTCACAGGTGGCCAACCTGGCAGAAGAC
ATTGTCAAGCGAGCCAAGGAAATCGGTACTCTGGACGGCCGTTCGCCCATTTCAGTTGCT
GCCGCAGCTATTTACATGGCAGCTGCACTATATGGAAATGACATGAGTGCACAGAGAGTC
AGTGAGAAGACGGGAGTGAGTGACGGAACTATCAAGACGTCGTATAAGCATTTGTATGAG
GCGAGGGAGAAGCTGGTGAGTAAGCAGTTGCTGGATTCGGGCAAGGTTTCTTTTGAGACG
TTGCCCAAGGTGTAGAACACTCATGAACGAAACCAGTGTGTGTTCTACGACGGACTAGGA
GGTTGTGAGCTAGCCTCACGTAGGTATTCCGGCGAAGCGGCTTTCCTAGACCGGCATCCG
AGAGTGCTTGCTCACAGTCGTGGGTATTATCTTGTCCGTAATACAGCCACGTCCAAGACT
TAGAGAGTGGAGTTACATGAAAACATAGAAAACGAATTGGAATTGTATTATTTTGATGAG
CTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C02563g_CDS-001

Protein length: 325 aa.
Product: Transcription initiation factor IIB (General transcription factor TFIIB), putative

>YALI0C02563g_CDS-001 MSFQQNLNVTLMCPECKILPPDIVERFAEGDMVCGQCGLVLSDRVVDTRSEWRTFSNDDQ
GSDDPSRVGDAMNPLLEGSQLNTIISFGAPGSSVGRDLNRTQSRSLQDKKDAALSAVYAK
ISQICDGISLPRVVSDAAKEVYKLVHDDKRLRGKTPDAIIATVIFIACRHANVQRTFQEI
GALTNVSKKEIRRTLELMKRLLEGTNIQAFRSTQTNPGALMPRYCSHLGLNSQVANLAED
IVKRAKEIGTLDGRSPISVAAAAIYMAAALYGNDMSAQRVSEKTGVSDGTIKTSYKHLYE
AREKLVSKQLLDSGKVSFETLPKV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG