YALI0C02519g

Overview

Description weakly similar to uniprot|Q6CHW5 Yarrowia lipolytica YALI0A04059g
Locus type CDS
Locus tag YALI0C02519g

Location

Species Yarrowia lipolytica Positions 352169..353995
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1827 (nuc.)
Previous locus YALI0C02497g Next locus YALI0C02541g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C02519g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C02519gYALI0C02519g_mRNA-001YALI0C02519g_CDS-001

Nucleotide sequence

 

>YALI0C02519g
ATGGAAACACCGGAGATTCGGCTAGAAATCCTCCGCCATTGTTCTCTCGACGCTCTCGTC
GCTCTTAGCCAAACATGCACCGATTTCAGAGCATTAATGCCTCTGCTGGACGACACTCTG
GTCCGACCGAAAGTGCTGAAACGAGTTCCATGGATGACTGTGGCTCCAGGAGCAGGTCTG
AAGTCGTGGATGGATTGTGCACGACTCATTGTTGCCCGATACAAGTCGCGGACACAAGAA
CCCGAACAATGGTGTACCACTGACTCTCAACATGTCTATGATATGGACGATTTGGCAAAT
ACTGCTGATATCGAGTATATTGACGGCGTCTGCGTGGATGGAGAAGCTCTACCCAAGTCG
TTTGACCCTCTGTTTGAATCTGCTGACTTCCCGGTACCTTATGGACTAGCTAGGGGCAAG
TATCTAATGAGCATTAGGGATGACGGTATCACTCTCGATATGACCACCATGGAACATGTT
CCCGAAAACCCAGACCAGTTCCCGTTCAAACTGCCAGACCCAGCAGATGTCTGGATTGCC
ATGGAAGACTTTGTCAGTGTGCGAGACGGTTCCAAATGGGTATTCAGATGCGCCAACTCT
TACATCACCATCATCAGCCAAGCCATGTTCTGCGTGAGGCAAGAGAGCGAAAGATGGATC
GTCATTGAAGACGAAACTGAACACGATGCAGAGGAAGACAATGTTTACATTATTGATAAA
CAAAAGGCCGTCAATAATACTCTTTTGTTTGATCGCCACAACTGTGTTTCCCACTATCCT
CGTGGATATATGAAGGACTACACTTTTCACCTTCTTCCAGGATCGCAGGGGGCATTCAGG
GTAAAATTTGACCTCACTGTTAGGAAATTATTTATATACTACCTTGATCTGACCAATGGA
GAACCGGAGATTCTGGTCATGGAGTTGAATGGCTCAGATCAGCTAATATACGAGAGGGGA
CATGCGTTCGACCCTATGCCAGACCTCTTTCTCATCTACAGGGGCATGCTCTATTACAAC
CACTACCAGCACGTGTTGATTCCTTTGTGGGTCGATCTTGAAGCGGTGCCTTCCACAGGA
AACAAGTACTCATGGAGGTCACTCAGCATGGCGTCTATTTCTCATGACTTCCACAAATCT
CCCGTGGAGTTGGATAGGTCCGAGGATGGAAGATGGGTGACTCAAGCCTGGAGCGAGCGA
CGAATCGTGTGTGATCTACTCAGGTTCAAAACGTACATTGTTCGTGACTATGGATGGCAA
AAGGACCCCTGGAAGGTTTCTGGAGAATACCATGAAGAAGTCAAGGAGATTGGATGCATA
TTTGTCGGAGCTGATCGAACTGCCGAGAAGCCCGTTTTTTACGTCATCAACAGGCCCTAT
CTGTTTGCTATGGACCTGATACTGCACAAGAGGGAGAAGCTGGAGCCTGACGTTTTCTTG
CACCGGGTTTCGAAACTCGTCTACAACTTGTTCTTTGAGGGTTCCAAACAGTTGCAAAAG
TCGGCCGGGTACTATGCTGAAGCTGTATACGAGCATATTGACCAGGTTCCGTGGCTCAAG
GGAGAACCATTGAACGCCGTGGATGAACAGCAGGAGGCGTTGAAGATGAAGTACGCTCTA
ACTGAGGAGGTTTACAAGCGGCCGCTTCCGATGACTCGGACACAGGCTAAAAAATCATGA
GTGGCAGAGCAGATTCAGATGGAAAGGGGATGAAGGATGAGAGGATGGGATCTCGTTTAG
ATCTTTTATAGAAGATGATATTGAAGACATTCAGAGCTGCTGACAACGATACTGAGGTTG
GTTAGAGCTCTCCACATAGTGTAGCAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C02519g_CDS-001

Protein length: 560 aa.
Product: Hypothetical protein of a 30-member gene family, conserved in the Yarrowia clade

>YALI0C02519g_CDS-001 METPEIRLEILRHCSLDALVALSQTCTDFRALMPLLDDTLVRPKVLKRVPWMTVAPGAGL
KSWMDCARLIVARYKSRTQEPEQWCTTDSQHVYDMDDLANTADIEYIDGVCVDGEALPKS
FDPLFESADFPVPYGLARGKYLMSIRDDGITLDMTTMEHVPENPDQFPFKLPDPADVWIA
MEDFVSVRDGSKWVFRCANSYITIISQAMFCVRQESERWIVIEDETEHDAEEDNVYIIDK
QKAVNNTLLFDRHNCVSHYPRGYMKDYTFHLLPGSQGAFRVKFDLTVRKLFIYYLDLTNG
EPEILVMELNGSDQLIYERGHAFDPMPDLFLIYRGMLYYNHYQHVLIPLWVDLEAVPSTG
NKYSWRSLSMASISHDFHKSPVELDRSEDGRWVTQAWSERRIVCDLLRFKTYIVRDYGWQ
KDPWKVSGEYHEEVKEIGCIFVGADRTAEKPVFYVINRPYLFAMDLILHKREKLEPDVFL
HRVSKLVYNLFFEGSKQLQKSAGYYAEAVYEHIDQVPWLKGEPLNAVDEQQEALKMKYAL
TEEVYKRPLPMTRTQAKKS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG