YALI0C01859g

Overview

Description similar to uniprot|Q02253 Rattus norvegicus Methylmalonate-semialdehyde dehydrogenase (acylating), mitochondrial precursor (MMSDH)
Locus type CDS
Locus tag YALI0C01859g

Location

Species Yarrowia lipolytica Positions 253878..255592
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 1715 (nuc.)
Previous locus YALI0C01826g Next locus YALI0C01881r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01859g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01859gYALI0C01859g_mRNA-001YALI0C01859g_CDS-001

Nucleotide sequence

 

>YALI0C01859g
ATGCTCAGCAGATCGACCCGACTGGCTCGAGTGGTCCAGACCTCCACCCGGCTCTACTCC
ACTGCCTACCCCACTACCCATGCGAAAATCGAGAACCCCGTGGACACCAAGGCGTTCATC
AACGGCCAAGCAGTCGCCTCCAAGGCTACCACCTGGTTCGATCTCCATGACCCCGCAACA
AACAACCTGGTGACGCGAGTCCCCCAGTCCACCGACGAGGAGATGCGACAGGCCGTCGAG
GCCGCCCAGAAGGCCTTCCTCACCTGGAAAGACACCTCCATCATGCACAGACAACAGGTG
GCTTTCAACTTTGTGCGTCTGATCCGAGACAACTGGGACCGACTCGCCGCCTCCATCACC
CTCGAGCAGGGCAAGACCTTTGCCGATGCCAAGGGAGACGTGCTCCGTGGCCTTCAGGTG
GCCGAGCAGGCCTGCTCCATCCCCAACACCCTCATGGGCGAGTCCCTGGAGGTGGCCAAG
AACATGCGAACCGAAATGTACCGTGAGCCTCTCGGTGTCGTCGCCGCCATTGCTCCCTTC
AACTTCCCCGCAATGGTGCCCCTCTGGTCCATCCCCCTGGCTCTCGTGACCGGTAACACT
CTCATCCTCAAGCCCTCCGAGCGAGATCCCGGCGCTGCTCTCATCCTCGCCGAGCTCATC
ACCGAGGCCGGTGCCCCTCCCGGAACCGTCAACATTATCCACGGAGGCGCCCCCACCGTC
AACTTCATCTGTGACGCCCCCGAGATCAAGGCCATCTCCTTCGTTGGAGGTGATGCTGCC
GGCAAGCACATCCATCAGCGAGGCGGAGCCAACGGTAAGCGAGTTCAGGCCAACCTGGGC
GCCAAGAACCACTGCGTTCTGATGCCCGATGCTGACAAGAACTTTGCTCTCAACTCCATT
GTCGGCGCTGCCTTTGGCGCTGCCGGCCAGCGATGCATGGCTCTGTCCACCCTGGTCACC
ACCCAGGGCACCGGCTCGTGGATGCCCGAGCTTGTCGAGCGTGCCAAGAAGCTCACCATT
AACGGTGGCTTTGAGGCTGACGCCGATCTGGGACCTGTCATCTCCCCCGCCGCCAAGGCC
CGATGTGAGGCTCTGATCCAGTCTGCCATCGACGAGGGAGCCACCGTTCTGCTCGATGGC
CGAGGACAGCACCCCGCCAAGTACCCCAACGGTAACTTCATTGGCCCCACCATCATCACC
GGTGTCAAGCCCGGCATGAAGTGCTACGACCAGGAGATTTTCGGCCCCGTTCTTGTTGTC
GTTGATACCACCGATCTTGACGACGCCATTGGTCTCATCAACCGAAACAAGTACGGCAAC
GGTGCTGCCATCTTCACCCGATCCGGTGCTGCAGGCAACAAGTTCCAGAAGCAGATCCAG
GCCGGCCAGATTGGTATCAACGTGCCCATCCCCGTCCCTCTCCCCATGTTCTCCTTCACC
GGAAACAAGGGCTCCTTCCTGGGCGACCTCAACTTCTACGGCAAGGCTGGTGTCATGTTC
CTGACCCAGTACAAGACCGTGACCACCCAGTGGCGAGACGAGGATGTCACCTCCCAGAAG
GCTGATGTTATCATGCCTACCCAGAGCTAGACCGTGAGTGAGCAGTCTTGCCGGTGACCC
AGTGACGATGTTCTACAGTTCAACATGCCGAGAATGGCTGGACTGTGAAAAGTATATAAT
GATGCATATGATTGAAATACGAGAAGTGACTGCGC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01859g_CDS-001

Protein length: 530 aa.
Product: Methylmalonate-semialdehyde dehydrogenase (acylating), mitochondrial precursor, putative

>YALI0C01859g_CDS-001 MLSRSTRLARVVQTSTRLYSTAYPTTHAKIENPVDTKAFINGQAVASKATTWFDLHDPAT
NNLVTRVPQSTDEEMRQAVEAAQKAFLTWKDTSIMHRQQVAFNFVRLIRDNWDRLAASIT
LEQGKTFADAKGDVLRGLQVAEQACSIPNTLMGESLEVAKNMRTEMYREPLGVVAAIAPF
NFPAMVPLWSIPLALVTGNTLILKPSERDPGAALILAELITEAGAPPGTVNIIHGGAPTV
NFICDAPEIKAISFVGGDAAGKHIHQRGGANGKRVQANLGAKNHCVLMPDADKNFALNSI
VGAAFGAAGQRCMALSTLVTTQGTGSWMPELVERAKKLTINGGFEADADLGPVISPAAKA
RCEALIQSAIDEGATVLLDGRGQHPAKYPNGNFIGPTIITGVKPGMKCYDQEIFGPVLVV
VDTTDLDDAIGLINRNKYGNGAAIFTRSGAAGNKFQKQIQAGQIGINVPIPVPLPMFSFT
GNKGSFLGDLNFYGKAGVMFLTQYKTVTTQWRDEDVTSQKADVIMPTQS*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG