YALI0C01573g

Overview

Description similar to uniprot|O42917 Schizosaccharomyces pombe Sister chromatid cohesion protein eso1
Locus type CDS
Locus tag YALI0C01573g

Location

Species Yarrowia lipolytica Positions 213797..215832
Strain CLIB 122 Strand Antisense
Chromosome YALI0C Total length 2036 (nuc.)
Previous locus YALI0C01529r Next locus YALI0C01584r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0C01573g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0C01573gYALI0C01573g_mRNA-001YALI0C01573g_CDS-001

Nucleotide sequence

 

>YALI0C01573g
ATGAGCAGGTTCACGTACCGCAATCTCTACAATCTCAAAACCCCGGAAAAGTCGTTCGAC
TCGCCCATGGCCTGCATTGTGCACTTGGACATGGACGCCTTCTTCGCCCAGGTGGAACAG
GTGCGTCTCGGTCTTCCTCCAGGCACTCCGGTGGCGTGTCGACAGTGGGACGGACTGATT
GCTGTGGGCTATGCGGCTCGAGCGTCGGGAATCACGCGTCATATGAGAGCTCCGGAGGCC
CAAAAGCTGTGTCCTAATTTGGTTATGGCCCATGCAGCTTCTTTCAAACGAGGAGAAGAC
ATGTGGGAGTACCATGCCAATCCCTCGGCGGACGACTACAAAATCTCTTTGGATCCCTAT
CGACAGGCTGGAAAGAAGGTGCTCAACATTGTCAAGCAGTACTCTTCGGTGGTGGAGAAG
GCCAGTGTTGACGAAAGTTATCTCGACCTGGGCCCTCGGATCTTCAATGAGATCATGATT
GCATTTCCTCAATTGCAGCTTCTGGACAATGATCTGGACAATTTCCTGCCCGCTCCACCC
CGTGCCCATGAGCTGAAGATCAGAGGATACAACTGGGACGGTCTGGGAGTGCTGGAAATC
GTCACTGATGTGTCACGATTCGATCCTGATATCAGAGTTCATGACGATACCATGGTGACG
GACTGGGACGACCTGGTTCTCATGTTTGGCGCCAGAATATCCAAACGGATGCGAGAACAA
GTCTATGAAGAGCTCAAGTACACTTGTTCGGCTGGTATTGCGCGCTGTAGAAGCGTGGCC
AAGCTGGCTAGTGCACAAAACAAACCCAACAATCAAACGGTGGTCAGAGCAGGAGCTCTC
AACAACTACCTGAAAAAGAAGAGTCTGACAGACATTGGAGGAATGGGGGGAAAGCTGGGA
GAGGAGGTTTTGGAGAAGCTGGGGCTGGATAAGGAAAGCAAGGACAATATCACCCAAGTC
CAGGCCTTGTCGAAACAACAGTTGCAACAGAAGCTGCAGAATGCTTCTCTCACAGAAAAA
GTGTTTAATCTGGCACGTGGAAATCTGTATCGAGGACTCAAGACGCGAATTGAGCTCAAG
TCGATGCTTTCAGCCAAAAACTTTGCCAGAGTGCCCTTGAAGGATCGAAAGGAAGCAGAG
TTATGGCTGGTTGTGTTTGCAGGAGAGCTGGCTATGCGTATTGTGGAGCATGAAAAAGAG
CTGGGCACCTGTAGGCGTCCCAGAACGGTGTCTCTTCAACATGCTCGGTTCAAACCGATG
GTGAAGCGGTCTAGACAGCAAGACTTGCCATTGGTACACACTAATAAGCTGAAGGAGGAG
TTATTTGCTGCTGGTGTCAAGCTGCTCAAGCTGATTGAGAATGAGCCTGAGCACGATGCA
TATCCCATATCCATGCTTTCTCTGTCTGTCACTGGGTTTGTGGAGCTTCCAGCGGGTGCC
TCTATTGGACATTTCTTCAAGACCATCACCACAGAGGCTCGAGAGAAGGCCGCGGTGGAG
AAGACCAAGGCTCAGCAGGTCAACACATTGTGGAACAAGCCCAAGGAGGAGAAGAAGAGC
TCGGGTAAGGACATCACGCAGTTCTTTGCCAAGAAGCCCAAAGAGAAGAAGGATTCTGAT
GAGACAACCAAGAAGCCAGAAGCATCCGACCCCGAAGTGAAGAAACCTCTGAGTTCTGAA
GCTAATGATTACAACTCCTCTTCGCTATTCGTGTTCAGTGACGATGAGATGGACGAGTAC
ATTGACACCTTCACTTGCCCGAAGTGCGACAAAAAGTACCCCATCGATGAGGAGATGGAG
CACAGTGACTGGCATGTGGCTGTGGAGTTGAGCAAGGCCAATCGACCTGAACCCAAGCCT
TTGAAGGTCGTCAAGCCCAAGGGGAAGAGAAAGGGAGATCGTCAGGCGAGGTTGGCCTTC
TAGGCGGATATGAGGCCAATCAGAGAGAGGCAGGGATCTGGAGTGCGAGTACTGTACTGT
ACTCAGGTTTTGCTCTTCCGTCTTGAACAGCAGTATTTATTATAGGCATTTGCATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0C01573g_CDS-001

Protein length: 641 aa.
Product: Sister chromatid cohesion protein eso1, putative

>YALI0C01573g_CDS-001 MSRFTYRNLYNLKTPEKSFDSPMACIVHLDMDAFFAQVEQVRLGLPPGTPVACRQWDGLI
AVGYAARASGITRHMRAPEAQKLCPNLVMAHAASFKRGEDMWEYHANPSADDYKISLDPY
RQAGKKVLNIVKQYSSVVEKASVDESYLDLGPRIFNEIMIAFPQLQLLDNDLDNFLPAPP
RAHELKIRGYNWDGLGVLEIVTDVSRFDPDIRVHDDTMVTDWDDLVLMFGARISKRMREQ
VYEELKYTCSAGIARCRSVAKLASAQNKPNNQTVVRAGALNNYLKKKSLTDIGGMGGKLG
EEVLEKLGLDKESKDNITQVQALSKQQLQQKLQNASLTEKVFNLARGNLYRGLKTRIELK
SMLSAKNFARVPLKDRKEAELWLVVFAGELAMRIVEHEKELGTCRRPRTVSLQHARFKPM
VKRSRQQDLPLVHTNKLKEELFAAGVKLLKLIENEPEHDAYPISMLSLSVTGFVELPAGA
SIGHFFKTITTEAREKAAVEKTKAQQVNTLWNKPKEEKKSSGKDITQFFAKKPKEKKDSD
ETTKKPEASDPEVKKPLSSEANDYNSSSLFVFSDDEMDEYIDTFTCPKCDKKYPIDEEME
HSDWHVAVELSKANRPEPKPLKVVKPKGKRKGDRQARLAF*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG