YALI0B22748g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B22748g

Location

Species Yarrowia lipolytica Positions 2991143..2992510
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1368 (nuc.)
Previous locus YALI0B22726g Next locus YALI0B22770g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22748g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22748gYALI0B22748g_mRNA-001YALI0B22748g_CDS-001

Nucleotide sequence

 

>YALI0B22748g
ATGCTTATAGCTTTATCAGACTTAGATTGTGCACTCTCATATGGCAAGCCCCAAAAAATG
ACGCCTGGATTGGACACGGTGCCCCAGGAGATTCTGGAGCAAATATGTGTGGATTGCGAT
CCCTGGAGCATCTATCAACTGTCAAATACCTCGAAATCGCTCAGAGTATCTCTTCTGGAG
TGGATGCCACAGCTCCTGAAGAGCTCCTTAGTCACAACATTCTTTCCCCTGGACAAAGAT
GCTTTTGCATCCTATGATTATCTCGGGCTCAAGAAGCGGATCAGCAAGGAAATGTCAGTA
TCCGTCCCTCTCACTCTCGAAGAGGCTATAACCCGCAGCCTGGCTATTCAGAAGAATCGC
ACCTCCAATCTGCCCCTAGTGGTGAAGACTGACGAGTTTGTGCACCCTGATGCCAATTTG
GCAGTTGGAAAGACCCATTCCTGGATAGGAGTTGAGTACGAGCCTGCACAGGACTCGAAT
CTCTTGGTTCTGTCTGTAAATGGCCTCTTTGCCATCTACGAGATCAACTACACAGATGGA
AGCATCAAGCTGATGCATTTGTCAGAGAAAGATTCCTGGTGGAGATCAAATGAAGGCTGG
CTGGTGTCTGGAGACGCCGAGTGGAAGCTCGATTTCACCTTCAGTGATGCCCCCGAATGC
ACCTCTCATCATCCGTACGCGGTGGAGTTTGTTTCGCGCAACCGCAAGTCCGCGGTGGTG
CACCGACGACGAATAATGGCCTATAAGCTGGGGGAGGCCCAGGAACTCAAGTTCGAAGTC
AACAGAAAATACGACGTGGCCAAAAAGTGGTGGAACTTCAACGACCGGTTCTCCATTGCA
CGCTTCATACCCAGAGATAGAAGGGACTCCAACTGCCAGCTGTTCTTGGTAAACTGGGAG
ACCATGACCACCCAGTTTCTGGCGGCCACTCCAGTCTGGGACTCAAACTACTTTCAGTTT
CAGAATGGATTCGTATACATGAACGAGGGCAGCATAAAACTTCGGGTCATGAACAAGCTG
GGGAAGTTACTTTGGTTCCAGGTCACCGACGACAATAATCTGCGTGTCAACCGGTACTAC
CCCAACTGGGAGATCACGACCATGTTTCAACGACACTCATGGACACCCAACGATGATGCC
AAGCAGGTTTTTGGCATGGTGGACAACATCCCTCATCTCTGGTCGTTTAGCTGGGAGTTC
CAGGCGTGGTTTGCTACTCAGGTCTTCTCAGAAGTCCCGTCCTGGAAAGCCGGAGACGAC
TGGGAAGGGTGGCAAGGTCGAGTGGACATCTCCACATGGAATAAGGACTCCCCTCCACCT
CCAGTCGCGCGTCGACAATATAGAGTGATGCATAGGAGGGAAGGGTAG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22748g_CDS-001

Protein length: 456 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B22748g_CDS-001 MLIALSDLDCALSYGKPQKMTPGLDTVPQEILEQICVDCDPWSIYQLSNTSKSLRVSLLE
WMPQLLKSSLVTTFFPLDKDAFASYDYLGLKKRISKEMSVSVPLTLEEAITRSLAIQKNR
TSNLPLVVKTDEFVHPDANLAVGKTHSWIGVEYEPAQDSNLLVLSVNGLFAIYEINYTDG
SIKLMHLSEKDSWWRSNEGWLVSGDAEWKLDFTFSDAPECTSHHPYAVEFVSRNRKSAVV
HRRRIMAYKLGEAQELKFEVNRKYDVAKKWWNFNDRFSIARFIPRDRRDSNCQLFLVNWE
TMTTQFLAATPVWDSNYFQFQNGFVYMNEGSIKLRVMNKLGKLLWFQVTDDNNLRVNRYY
PNWEITTMFQRHSWTPNDDAKQVFGMVDNIPHLWSFSWEFQAWFATQVFSEVPSWKAGDD
WEGWQGRVDISTWNKDSPPPPVARRQYRVMHRREG*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG