YALI0B22638g

Overview

Description highly similar to uniprot|P50623 Saccharomyces cerevisiae YDL064w UBC9 E2 ubiquitin-conjugating enzyme
Locus type CDS
Locus tag YALI0B22638g

Location

Species Yarrowia lipolytica Positions 2974711..2975444
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 734 (nuc.)
Previous locus YALI0B22616g Next locus YALI0B22660g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22638g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22638gYALI0B22638g_mRNA-001YALI0B22638g_CDS-001

Nucleotide sequence

 

>YALI0B22638g
ATGTCGGAAGACTCGTTGATGCAGAAGCGACTCATGGAAGAGCGGTGAGTTACAAAGACC
AATCTTTATTCACCTAGACGCCCCGTTTTAACTAACTCAGGAAAACCTGGCGAAAGTCAC
ATCCGTTTGGCTTCTTTGCTAAGCCCGCCAAGGACCAGAACGGAAACCTGGATCTCACTA
ACTGGAACGCCGGCATCCCCGGAAAGGAAGGAACCGCCTGGGCCGGTGCCACATACCCCA
TGCTCATCACCTTCCCCAAAGACTACCCGACCAAACCCCCACGATGCCGATTTGATGCTG
GGTTCTATCACCCCAACGTCTACCCCTCGGGCACCGTCTGTCTGTCAATTCTGAACGAGG
AGGAGGACTGGCGACCTTCCATCACGCTGTCTGAGATTGTCATGGGTATCCAGGAGCTCA
TGAACAACCCCAACCCCCACTCTCCCGCCCAGAACGATGCATTTGCCGCCTTCCAGAAGA
ACAAGGAGGAGTACGATAAGCGGGTGGCCGAGCAGGTCAAAAAGTACGCTGCTTAGAGTG
ATACTCGGCGTTCGTATTAATGCATTACGCGATGCTGGAGGACTTTAGAACTGGAGTCTT
GAAGGAGGATCCAAGGGCCGAGATGAGCTGATCCACCCTCACGCGACTAAACATTAAATA
TAACATATGTATGCGTGACGCTTGTGGGTCAGCGGTTTTCGCATGTTTTAGTCAATAGAT
GTATTTTTTTTCTC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22638g_CDS-001

Protein length: 160 aa.
Product: SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, putative

>YALI0B22638g_CDS-001 MSEDSLMQKRLMEERKTWRKSHPFGFFAKPAKDQNGNLDLTNWNAGIPGKEGTAWAGATY
PMLITFPKDYPTKPPRCRFDAGFYHPNVYPSGTVCLSILNEEEDWRPSITLSEIVMGIQE
LMNNPNPHSPAQNDAFAAFQKNKEEYDKRVAEQVKKYAA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG