YALI0B22616g

Overview

Description similar to uniprot|O14156 Schizosaccharomyces pombe Protein phosphatase 2C homolog 4
Locus type CDS
Locus tag YALI0B22616g

Location

Species Yarrowia lipolytica Positions 2973053..2974279
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1227 (nuc.)
Previous locus YALI0B22594g Next locus YALI0B22638g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22616g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22616gYALI0B22616g_mRNA-001YALI0B22616g_CDS-001

Nucleotide sequence

 

>YALI0B22616g
ATGGTGCCTCGACGAGGAGCCACAATTGGGGCGCCATTGCCCCGTATATTCTCGAGACAC
GTCAGCAACTACTTTCACTATCGCCAGGGCGACGTGGCGGGCCGCATAAACCTGCTTTCG
CTTCCGGGCTTCATTGGACACTACACAAGCCGAGTCAACAGACCCTACAACGAAGACCGC
TACAGCGCCTCCGTATTGAAACTACCTCGAGGCAGCACTTTTGCGCCTCGATCTCTGCGA
AAGGGCATGTCTGCCGAGCGTCAGGTCTTCAACTTTGCCGTCTACGATGGCCACGGATCC
GACGAGTGCTCCGAGTTTCTTAAGGACAAACTGGCCACCTATGTCGAGAAGGCTGACCTC
AACGACGCCGACGACATTACCACCAAGTACAAGGAGCGGTTTGGAGGCTACTGGCGCCGA
TGGAAGCAGATGGACAAATACCGGGGTAGAATGAGCCCCTACGACGACTTCCAGTTACGA
CTACCGTTGGCGTTCCTGGAGGCCGACTACGATTTTGAAGGTAAAGGAGGAAGTACATGC
ACATCGGTGTTCTTGTATTGTCGCCATGTGGCCCATTCAGAGGCCGGTCCCCTACCGCCG
GGGGCTGAGGATAACATGTTTGACCCAGAGAACGACCTCTCTCTAGTAGTGGCCCATGTC
GGAGACACTCGATGCATCATCTGTGATGCCAAAGGAGAGGCCACACCTCTTACCATCGAC
CACCATCCCAGCGCTCCCACCGAGGCCGATCGTCTGCGTCGATTTGCATCTTCATTCTTC
ATGGACTCCTTCGGCGAGGAGCGGTTCGGTGTCTTTGCCAACACCCGAGCCTTTGGAGAC
ACACTTATGAAGGCCAAGGGTGTGAGTGCCGAGCCCGACGTGCGAGAGGTTGCACTCCAG
GACGAACAGTTCCTGGTGCTGGTTTCCGACGGAGTTTCTGGCGACGTGTCTGATCAAGAG
ATCGTGGACCTGGTAACCATTACCGCCAACAGTAGCGGTTCTGGACGAGGATCGCCACAG
CAGGCTGCCCAGGAGGTGGTTGAGTACGCAGCGGCTTTGGGTGGCTCGGACAATGCCACT
TGCATGGTTATCCGTCTAAGAGGATGGGGCAATGGCTCGCAGGTGGACCGAACCGGCGAG
CTACGAGAATACCGACTCAAAAATGTCGACTCCCGTGGAAATCGAATGTAGGCATGTATA
TTTATAAACAGTAACTTTGGCAATGTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22616g_CDS-001

Protein length: 397 aa.
Product: Protein phosphatase 2C homolog 4 (EC 3.1.3.16) (PP2C-4), putative

>YALI0B22616g_CDS-001 MVPRRGATIGAPLPRIFSRHVSNYFHYRQGDVAGRINLLSLPGFIGHYTSRVNRPYNEDR
YSASVLKLPRGSTFAPRSLRKGMSAERQVFNFAVYDGHGSDECSEFLKDKLATYVEKADL
NDADDITTKYKERFGGYWRRWKQMDKYRGRMSPYDDFQLRLPLAFLEADYDFEGKGGSTC
TSVFLYCRHVAHSEAGPLPPGAEDNMFDPENDLSLVVAHVGDTRCIICDAKGEATPLTID
HHPSAPTEADRLRRFASSFFMDSFGEERFGVFANTRAFGDTLMKAKGVSAEPDVREVALQ
DEQFLVLVSDGVSGDVSDQEIVDLVTITANSSGSGRGSPQQAAQEVVEYAAALGGSDNAT
CMVIRLRGWGNGSQVDRTGELREYRLKNVDSRGNRM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG