YALI0B22550g - MVA1

Overview

Description uniprot|Q6CDN6 Yarrowia lipolytica YALI0B22550g MVA1 Hydroxymethylglutaryl-CoA lyase
Locus type CDS
Gene name MVA1
Locus tag YALI0B22550g

Location

Species Yarrowia lipolytica Positions 2968665..2969756
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1092 (nuc.)
Previous locus YALI0B22528g Next locus YALI0B22572g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22550g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22550gYALI0B22550g_mRNA-001YALI0B22550g_CDS-001

Nucleotide sequence

 

>YALI0B22550g
ATGCGAAGAACACTTGCCCGTCTCCAGCACCACTCCAACGCGTTTGTTCGAATCGTCGAG
GTTGCGCCTCGAGACGGTCTTCAAAACGAAAAGAAGATCCCTTCCACCGAAACTAAGACT
TCTCTGATTGACCGGCTGGTAGCTACCGGCCTTCAGACTGTGGAGGTGACCTCGTTTGTG
TCGCCCAAGTGGGTCCCTGCCATGGCAGATAATGAAGCCATTCTGAAACACTGCAACCAG
ACCCATGGAGGAACCACTGTCGACTTCCCAGTGCTGACCCCTAATGCCAAGGGCATGCAG
AAGGCATTGGAGCTCGGAGCCAAGGAGGTGGCCATCTTTGCTGCTTCTTCCGATGGCTTC
GCTAAAAAGAATACAAACTGCACTGTTGATGAGAGCTTTGAGCGATTCGAGGAAGTTCTG
AAACTGGCCCGTAACGCTGGCCACCCAGTCAAGGTCCGAGGCTACCTGTCTACCGTCATT
GGATGTCCCTATGACGGTCCCACAGAACCCGCACGTGTGGCAGAGCTAGCTCAGAGACTC
ATTGATCTGGGATGTTACGAGGTATCTCTAGGTGACACTATCGGTGTTGGAACTCCCGGA
ACCATTGAGATGATGTTGGATCAGGTGATGCGACGGGTGCCCGCTGAGATGCTGGCTATT
CACGCCCACGACACTTACGGCCAGGGTGTTGCCAACGTCATGAAGGCAGTCGATATGGGG
GTTCGTGTGGTTGACGCCTCTGTAGCTGGTCTTGGAGGCTGTCCCTACGCAAAGGGAGCT
ACTGGCAATGTTGCCACTGAAGATGTGGTCTATGCCCTGCATGGAAGTGGCTACGACACT
GGTGTCAACCTGGATCTACTGGCTGAAACTGGCGAGTGGATTTCCAAGGAGCTCGGTCGA
CCCAACGGATCCCGAGCCGGTCGAGCAATCTGGACCAAGAACCAGGCCAAAATTTGATTT
TGACGAGTTTGGTGACGATTGGTTGACGCTCTCCAAATGACCGGTACAGTGCATACAGTA
CATTGTACGCAACAAAACAGTTATGGAGTAGTAAATAATGCATAGATTGATTAATTTATA
TGATGGACGTGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22550g_CDS-001

Protein length: 319 aa.
Product: Hydroxymethylglutaryl-CoA lyase
Gene: MVA1

>YALI0B22550g_CDS-001 MRRTLARLQHHSNAFVRIVEVAPRDGLQNEKKIPSTETKTSLIDRLVATGLQTVEVTSFV
SPKWVPAMADNEAILKHCNQTHGGTTVDFPVLTPNAKGMQKALELGAKEVAIFAASSDGF
AKKNTNCTVDESFERFEEVLKLARNAGHPVKVRGYLSTVIGCPYDGPTEPARVAELAQRL
IDLGCYEVSLGDTIGVGTPGTIEMMLDQVMRRVPAEMLAIHAHDTYGQGVANVMKAVDMG
VRVVDASVAGLGGCPYAKGATGNVATEDVVYALHGSGYDTGVNLDLLAETGEWISKELGR
PNGSRAGRAIWTKNQAKI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG