YALI0B22462g

Overview

Description weakly similar to uniprot|W9YIN9 Capronia epimyces hypothetical protein A1O3_02607
Locus type CDS
Locus tag YALI0B22462g

Location

Species Yarrowia lipolytica Positions 2948052..2949987
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1936 (nuc.)
Previous locus YALI0B22440g Next locus YALI0B22484g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22462g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22462gYALI0B22462g_mRNA-001YALI0B22462g_CDS-001

Nucleotide sequence

 

>YALI0B22462g
ATGCTGTCTCTATCAGAACACATTTACTCTGCCGGCTTCCTCAGGGGAGAACTCTCTGAT
GTCAAGATTGTGGCGTTCCAGAAGGAGTACAACCTACACAAACTCATCCTCGACCGCTCG
CCATACTTCCACTCGCTGTTCTCGGCTAAATGGGACACAGAAGGGCGACCTGTTCATCAT
CTAGATTTCTCCATCGATCACAACATCACAGAGCAGGCATTTGACCAATGTCTTCAGCGG
CTATATGGAGGAGCGGAGGACCCGTCGGAGATTCTGGGGTTCCCGGAGCGAGTGTCTGCA
GCATTCGAGCTGTTCGCCACAGCCAACTTCCTCAATCTGACCGACCTAGTTGACTTCTGT
CTGTTGTTGATCATAAACTCGCTGACGAAATTCACAGTGGCCGAGACCCTGTGTTTTGCA
TTGGAGAACCACTACCCTCAAAGTGATACAATCATCGACTCCTGCAAATCCTTCCTGTGC
GCTGAGGGCTCAGAGATGTCCTACCTCCAATGGTCTCGTATCCCCATTCCCATTGTGGTG
GAGGTGGTGTCCTCAGACGGCTTCTTCATCCAGTCAGAGTGGGAGAGATGCATGTGGGTA
GTAGGCTTTCTCACCGAAGAAGACTACCTCAGTGATTTCAACAATAACGAGAGTCCCATC
GAACCCGAAGTTGAGGAGGACTCAGACTCATCGTCCAACTTCGACATTGGTCTCGAAAAG
CTCTCATTGAATGCAGAAATCAACCTCAGCACGCCTACAGGCTCATACACCGAACTGAAT
CGTCTTGGGACCGAGCCAATTGGTAGTCCTGAGCAAGTCAAGAAGGCCTCCTCTTCTACT
GCCTCGGCCCAGACCGAGGAGGATGAATGTGACATCGAGACCCAGTCCACCTCATCGCTG
GACTCAGAAATTGCATCTCAGCTCCACGAACTCACAAAGGCCATCCACTACTGTCACCTG
TCTCTAGCTCAACTTCAGCATCTAGAGAAGATCAAGGACAAGCGTGGAAAGCTGCTTTTT
GACAAGAGCGTGCTTCAAGAAGGTCTCTGGCAGCAAATGAAGCTGAAACAGCTGGTTCTG
AGCACTGGAGATGACCGTCTGGACGTGTGTATGTCCACCAAGCAGCTGATGGCTATGGGT
GCCGAGAATGAAGACGACGCCGAGTTGTTCTATCCCGTTCCTTCGCACGATAAGAGTGTC
GCTGGTCGACGATCTAACGATGCCATCACAGCCAAAGACTACTATACGGGTAGATGTGAT
CCTGAAGCGCCTCTAGAGACTTCTGATCCCGATGCTCAGGTGACCTTCTCCCCTTTCCCC
CCCTTTAGATTCTCTGTCAAGTTCGACGACATTAGTCAGCTCAAGGGAGAGAGTAAACTG
TATACGGATAATGCAGTTTGGTACGCAGGTACATGGTGGAGTGTGTATCTGCAGAAGATC
AACAAGAAGAGTCCCCAGCTGGGTGTCTATTTGCATCGAGAGGCTCGAACCCAACGGGAT
CTGGCCACAGGGGCCAACTCGTCCTACACGCTACTTTCGGGAAAGAGCACTGCCAAGTCA
ACCGTTGGTTTGGATGACACGACCACCATGGAGCTCAAGACTGAGCCTCGGCTGGTGAGT
TTCCCTGCCACTGAGCAGCCTGCTGATTACAACGACGACCGGCCTCAGATCATGAGTTAT
TTTGAGATCTACACCCCATCCAAGCGGGGTAAGAACCTCACCTGTTTCTCGTCTTCTCCG
TCCGCCTTTTCCTGTGCTCAGAGCTGGGGCTGGAGATCGTCTTCGCTTTATCACTACGCT
GAGGAGAACGCCAAGCAGCATACTCGGGCCAGTCTCAAGTTCATGGTAGTGATCGGTGTC
GTTTAGGACTACTACATGATGGTAGTCCAGTAATAATTTAACACATATTCAATAATACCA
GCAGGTAATTATCGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22462g_CDS-001

Protein length: 622 aa.
Product: Conserved hypothetical protein

>YALI0B22462g_CDS-001 MLSLSEHIYSAGFLRGELSDVKIVAFQKEYNLHKLILDRSPYFHSLFSAKWDTEGRPVHH
LDFSIDHNITEQAFDQCLQRLYGGAEDPSEILGFPERVSAAFELFATANFLNLTDLVDFC
LLLIINSLTKFTVAETLCFALENHYPQSDTIIDSCKSFLCAEGSEMSYLQWSRIPIPIVV
EVVSSDGFFIQSEWERCMWVVGFLTEEDYLSDFNNNESPIEPEVEEDSDSSSNFDIGLEK
LSLNAEINLSTPTGSYTELNRLGTEPIGSPEQVKKASSSTASAQTEEDECDIETQSTSSL
DSEIASQLHELTKAIHYCHLSLAQLQHLEKIKDKRGKLLFDKSVLQEGLWQQMKLKQLVL
STGDDRLDVCMSTKQLMAMGAENEDDAELFYPVPSHDKSVAGRRSNDAITAKDYYTGRCD
PEAPLETSDPDAQVTFSPFPPFRFSVKFDDISQLKGESKLYTDNAVWYAGTWWSVYLQKI
NKKSPQLGVYLHREARTQRDLATGANSSYTLLSGKSTAKSTVGLDDTTTMELKTEPRLVS
FPATEQPADYNDDRPQIMSYFEIYTPSKRGKNLTCFSSSPSAFSCAQSWGWRSSSLYHYA
EENAKQHTRASLKFMVVIGVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG