YALI0B22440g

Overview

Description similar to uniprot|Q9SK84 Arabidopsis thaliana Putative phospho-2-dehydro-3-deoxyheptonate aldolase 1
Locus type CDS
Locus tag YALI0B22440g

Location

Species Yarrowia lipolytica Positions 2945729..2947457
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1729 (nuc.)
Previous locus YALI0B22418g Next locus YALI0B22462g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22440g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22440gYALI0B22440g_mRNA-001YALI0B22440g_CDS-001

Nucleotide sequence

 

>YALI0B22440g
ATGCCACCCAAAGTCGTTATTACCGATCCCACGCCCCTAAAGGCCTCCGAAGGCGCAAAG
TCCGCCGCCAAGCTGCGATCCAAGTCCAAGGAGGCTGCCCAGCTCCCCAAGCCCAACCTG
GGCGACGCCTGGGCCCCCACTTCCTGGCAGTCCAAGCCCATCACTCAGGACGTTGTCTAC
GACGACTACACCGGAGTGGAGGCCGCACTGGAGAAGCTGGAGTCCCTGCCTCCTCTGGTT
TCGCCCTTTGAGATTGAGAAGCTGCGAACCAAGCTCGCCCACGCTGCTAACGGCAAGGCC
TTTGTTCTCCAGGGAGGAGACTGTGCCGAGCTGTTTGATTACTGCACACAGGACCGAATT
GAGTCCAAGCTCAAAGTTCTGATGCAAATGTCGCTGGTACTGCTGTGGGGAACTGGACTT
CCCGTGGTTCGAATCGGCCGAATTGCCGGCCAGTACGCCAAGCCCCGATCCAAGCTCACC
GAGGAGGTGGACGGCAAGACTATCAACTCTTTCCGAGGAGACAACATCAACGGCTTTGAT
GTGTCGGACCGAAAGCCCGATCCGGCCCGTCTGGTGTCCTCCTACTTCCACTCGGCAGCC
ACTCTCAACTACATTCGATGTGTGCTTGCGTCTGGCTTTGCCGATCTGCGAAAGGTGGAC
TGGTCGCTGGAACACGTCCAGAACCCTGAGACCAAGGAACGATACCAGAAGACTCTGGAC
GCCATCACCGAGGGTCTGCAGTTCATGCACACCATTGGAGCCGACACTGCCCAAGATATG
CAGACCATTGACTTCTTCACTTCCCACGAGGCTCTACTTCTGGAGTACGAGCAGTCTCTG
ACCCGAGAGGCCAATGGGCACCATTACAACACCTCCGCACACTTCATTTGGATCGGAGAT
CGAACCAGACAGCTCGACGGAGCCCACGTGGAGTTCTTCCGAGGAGTGCGAAACCCCATT
GGAATCAAGGTCGGACCCACAATGAAAGCCGACGAGCTGGTGCGACTACTGGACATTGTG
GACGCCAACCACGAGGACGGACGAGTCACCCTTATCACTCGATACGGTGCCTCCAAGGTG
AAGGAGCTGCTTCCTGCCCATATCAAGGCTGTTCAGTCATCTGGACATAAGGTTGTATGG
ATGTCTGATCCTTGCCACGGCAATACCCAGACTTCTACCGTCACCAAGCTCAAGACCCGT
CACGTGGACGACATTGTTGAGGAGCTGCGACAGGCTTTGGAGATCCACCGGGAGTGTGGT
AGCAAGCTCAACGGCGCCCATCTCGAGCTCACCGGAGACGCTGTAACCGAGTGCATTGGA
GGTTCTGCTGGTCTGTGCGACGAGGATCTCGTTGTGAGATACGACACTGTGTGCGACCCT
CGACTGTCTTTGTCTCAGTCTCTGGATGTGTCCTTCCTTATTGCAGACAGCATGAGAGCC
CAGAAGTAGTCTTTTCTACCGAGTCTAGCAACAAGTACTAGGTGTGAGTGACACGACATA
TAATTCTGCTCACCCGTTTACATTCTACTGAGTCCGGTCTATGGCCAGAAACCTATCTGA
TGAGTGATGATTTTGACTATTTGGAAACAACATGATCTACAAGCTACAGTGCAGTACTCG
TACTCGTACATACCGTCGCTGCCGGATCCACTTTATGTCTCAACCACCATCGACAATACA
TGTATATAGCTAGTTTTTGCAAGTCTAAGAGCACGAGTGTATGTATGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22440g_CDS-001

Protein length: 483 aa.
Product: Phospho-2-dehydro-3-deoxyheptonate aldolase 1, putative

>YALI0B22440g_CDS-001 MPPKVVITDPTPLKASEGAKSAAKLRSKSKEAAQLPKPNLGDAWAPTSWQSKPITQDVVY
DDYTGVEAALEKLESLPPLVSPFEIEKLRTKLAHAANGKAFVLQGGDCAELFDYCTQDRI
ESKLKVLMQMSLVLLWGTGLPVVRIGRIAGQYAKPRSKLTEEVDGKTINSFRGDNINGFD
VSDRKPDPARLVSSYFHSAATLNYIRCVLASGFADLRKVDWSLEHVQNPETKERYQKTLD
AITEGLQFMHTIGADTAQDMQTIDFFTSHEALLLEYEQSLTREANGHHYNTSAHFIWIGD
RTRQLDGAHVEFFRGVRNPIGIKVGPTMKADELVRLLDIVDANHEDGRVTLITRYGASKV
KELLPAHIKAVQSSGHKVVWMSDPCHGNTQTSTVTKLKTRHVDDIVEELRQALEIHRECG
SKLNGAHLELTGDAVTECIGGSAGLCDEDLVVRYDTVCDPRLSLSQSLDVSFLIADSMRA
QK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG