YALI0B22330g

Overview

Description weakly similar to uniprot|Q10414 Schizosaccharomyces pombe Hypothetical protein C1F3.09 in chromosome I
Locus type CDS
Locus tag YALI0B22330g

Location

Species Yarrowia lipolytica Positions 2936706..2938249
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1544 (nuc.)
Previous locus YALI0B22308g Next locus YALI0B22352r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22330g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22330gYALI0B22330g_mRNA-001YALI0B22330g_CDS-001

Nucleotide sequence

 

>YALI0B22330g
ATGAGCAGCACCAAAGTGTGAGTATGAGGACGACTGCGAGTTTCCACAGTTACGCGACTA
ACCACAGACTTGTTTTTGGCGATATTTCGTCGGATCCTAAGACCGCCATTGCCAAGGCCA
ACACCATCAACGGTGGTAAGAATGGTCCCTTCCGCGCCTTCATTGTGGTGGGCAAGGTGT
TCACCAAGAACAACTTTGAAGAGGTGAATGGCGCATTACAGGACGGATCTGTATCTGTCG
ATCTTCCTATGTTCTTTACGGACGGTGAGGGTCTTCCTGAAGACTCTGCAACTAATCAGA
CTGATGTTGTGGACATTGCACCTAATGTGACTTTCCTCAACCAGTGGGGTCGACTGATGA
CCGACGATTTCATTATCCAGAATGCCACCAGCGGCAGTAACGACAGGAAGACTGCACCAA
CCGATATTCTCATCACCGATAAGTGGCCCTCGAATCTGCCTCGGCTATCTAAGGTTGGAT
TTGCCGTACCTCAAACGGCTGAGCGAGCCACCAATAACGACAAGACTATCGATGCAACAT
CAAAGGACGCGTCTCCTCTTTACCACTTTTCAGGGTCCGAATCTTTCTGGGAACGAGAGC
CGTTTGCGAACGAAGCAGGTAAACATACTCGTTTCATTGGTCTGGCACCATTTGGAGGTA
AACAGAGATGGCACTATGCCTTCACTTTAAAGAAGGACGACACATCGACGCCTGTTAACG
CCACAGAGTGCCCCTATCTTAAGGAAGACAAGGTAGAAGAGGAGCCATTGAAACGAGCCA
ACGAGGATGATGGCGATCCAATGGCCAAGAAACCCAGAATTGCGCCCTCAGATTGCTTTC
TGTGTCTCTCCAACCCCAACTTGGCTGCTCATCTGGTGGTGTCTATTGGACAGGAATCTT
ACATGGCCATGGCCAAGGGCCCCCTATTACCAGGCCACGTGATGCTTATCCCAATCAAAC
ACAATCCTGACTTTTGCACAGAATCAAGACCCTCCACTAACCCCCGTCACAGACATCCCG
TTCGGTTTGTTTCACCTAAACTGGCCCTGGAGCTGAGAAAGTACCAGATTGCTCTCAAGC
AAATGCATCCTGGAGGAGTGGTATTCTATGAAATCGCAAAGGCCAAGGGTGTCCACGTTC
ACCAACAGGCCGTTCCTATTCCCCAAGAGAAGATTAATAATGTGGAGAATCTTCGAGAGT
TCTTCATCAAGGAGGCCAAAGAGTGCGGGTTCAGAATGGAAAATAATGGAGAGCTTAGAG
ACGACCAAACTAACTATTTCCGCATCGAGTTCCCCAACAGTGACCCTATTGTCATTAAGC
TGAATCGTCAGAACCCCAAATTCGACGTGACCTGGCCCAGAAAGTTGCTCGCTCAGTGGT
TTTTTGGTAACAAGGAGCGAGGGGACTGGAGAAACTGCTCTCAGACGGAAGCTGAAGAGA
CTGAGGCGGCGGATAAGATCAAGGGCGACTTTGAAACCTTTGATTTCACTCGATAGAATC
AAACTAATGGCATTTGTATTATATAACGTAACAATAAAGCATGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22330g_CDS-001

Protein length: 482 aa.
Product: Conserved hypothetical protein

>YALI0B22330g_CDS-001 MSSTKVLVFGDISSDPKTAIAKANTINGGKNGPFRAFIVVGKVFTKNNFEEVNGALQDGS
VSVDLPMFFTDGEGLPEDSATNQTDVVDIAPNVTFLNQWGRLMTDDFIIQNATSGSNDRK
TAPTDILITDKWPSNLPRLSKVGFAVPQTAERATNNDKTIDATSKDASPLYHFSGSESFW
EREPFANEAGKHTRFIGLAPFGGKQRWHYAFTLKKDDTSTPVNATECPYLKEDKVEEEPL
KRANEDDGDPMAKKPRIAPSDCFLCLSNPNLAAHLVVSIGQESYMAMAKGPLLPGHVMLI
PIKHNPDFCTESRPSTNPRHRHPVRFVSPKLALELRKYQIALKQMHPGGVVFYEIAKAKG
VHVHQQAVPIPQEKINNVENLREFFIKEAKECGFRMENNGELRDDQTNYFRIEFPNSDPI
VIKLNRQNPKFDVTWPRKLLAQWFFGNKERGDWRNCSQTEAEETEAADKIKGDFETFDFT
R*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG