YALI0B22110g

Overview

Description similar to uniprot|Q12446 Saccharomyces cerevisiae YOR181w LAS17 component of actin cortical patches
Locus type CDS
Locus tag YALI0B22110g

Location

Species Yarrowia lipolytica Positions 2895905..2897837
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1933 (nuc.)
Previous locus YALI0B22088g Next locus YALI0B22125g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22110g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22110gYALI0B22110g_mRNA-001YALI0B22110g_CDS-001

Nucleotide sequence

 

>YALI0B22110g
ATGGGTCTTCTCAACTCGGCGGACAAGGAGAAAATCAAGCGAGTGGTGCCGAAAAACACC
AACAAGGTGATTGACTGCACCATCGCACGTCTCTACATTGCCTACCCGGACCCTGATAAC
TGGCAGTACACCGGGCTGTCTGGAGCGCTAGCTCTGGTGGACGATCTTGTGGGCCACACT
CTGTTTCTGAAGCTCATTGACATCCACGGGTCGCGAGGCGTGCTCTGGGACCAGGAGCTG
TATGTTGGCGTCAACTACTTCCAGGACAGAACGTTTTTTCACTCGGTGGAGCTGGAGGAC
TGTTTTGCAGGCTTTCTGTTTGAAGACGAGTCCGAGGCCGCTCACCTGTTCAAGCGGATC
CAAAACAGAGAAAAGTACGCCAGCAAGGATACGGTCAAAAACAAGAACGCCATTGCGCTG
AAAAAGGCCGCTCCAGCAGAAAAGGCTGCCGTGGGACCCAGAGGAGAACCCCGTACTCGA
CTGGGATACTCGGGACCCGTCTACTACGACGACGAGCCGCCGGAAGAATGGCGAGCGCTG
TACAGAGAGTTGGAGGAGCAGGGAATCACTCCGGAGATGATTGCCGATAACACCGAGTTC
ATCAAGGAACACATTCGACAGACGGGAGGTCCTCTGGTGGGTCTGGAACCTCCAATCCCT
CGAAACAGAGGCCGGGGACGAAGCACGAGTAATGCCACTTCTTCTTCGGCTGATACCAAT
GCCCGAAAACCCCCACCGCCTCCTCCCCCAGCTGCTGCTGCTGAATCAACCCAAAACAAC
GACAGAAGAGCAGCTCCTCCTCCCCCGCCGGCCTCGGCTCCCCCTAGCTACTCTAGCACT
CCAGAGCCCGACTTGCCGGCCACCCCTGCTGCTCCCTCCGACCCACCAGCTGCTGTAGCA
CCCCCCAGACGGTTCAATGTGCCGCCTCCCCCATCTTTCATGGGCAAAAACGCAGGTGCT
CCGCCTCCTGCGGCAACTCCAGCCTCTCCAACAGCAGCAGCAGCCCCACCAGCGCTTCCA
GGACGGTCGCTGCCGCCGTCGCTGCCCTCTCGTGGTTCGCCAGCGCCCCCTGCACTACCA
GGACGATCGGTGCCTCCTCCTCCAGAACTTCCTGGACGAGCTGTGCCTGCCCCTCCCCCC
TCTCTGCCGGCACGAGGAGGAACCCCGGCAGCAGGAGGACCCCCTCCCCCTCCTCCACCC
AGAGACGGAGCCACTCCTCTATCGAGACCTCCTCCTCCTCCCTCCAGATCGGCCATTCCG
CCCCCTGCTGCTGCCCCAACTGCATACACACCCCCTCCCCCTCCTGCAGCAGCTTCTCCA
GCGGCAGCTCAGAGCTCATACACTCCTCCTCCTCCTCCTCCGCCCCCGGCCTCGTCGAGA
CCTGTTCCTGGAGTTCCTGGAGGTGTGCCCCCTCCTCCTCCCCCTCCGCCCCCCGGCCCT
GGACCTGCTGCAGCTGGTGGACCTCCTCCACCCCCTCCGCCTCCTCCTGGTGCTGCTCCC
TCTTTTGGAAGTGCTGCTCCCCCTCCTCCCCCCGGTCCTCCCCCAGCCATGTCTGGAGGT
CCTCCTCCCCCTCCACCCCCTCCTGGAGACTTTGGAGTCACTCCTGGTCCTCCTCCTCCT
CCTACCGGAGACGCTGGTCGAGACGCGCTGCTGTCGTCTATCACAGCTGCTGGTGGAATC
GGCTCTCTTAAGAAGGTGGACAAGTCGCAACTTGATAGACCTTCGGTCATGCTGCAGGAG
GCTCGTGGAGAGAGCCCTACCATTCCTTCGGCTGCCCCGGGAGCTCCTGGCGGTGGCAAC
TCGCTGGCAGACGCCCTGGCCTCGGCTCTTAATAAACGAAAGGGCCAGGTCAGTAAGTCT
GACGACGAGTCCGACGGTGATGACTGGTAGTATAATGACTATGTAATTAACAGATGAAAC
GATGGGGCTACGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22110g_CDS-001

Protein length: 630 aa.
Product: Actin assembly factor, putative

>YALI0B22110g_CDS-001 MGLLNSADKEKIKRVVPKNTNKVIDCTIARLYIAYPDPDNWQYTGLSGALALVDDLVGHT
LFLKLIDIHGSRGVLWDQELYVGVNYFQDRTFFHSVELEDCFAGFLFEDESEAAHLFKRI
QNREKYASKDTVKNKNAIALKKAAPAEKAAVGPRGEPRTRLGYSGPVYYDDEPPEEWRAL
YRELEEQGITPEMIADNTEFIKEHIRQTGGPLVGLEPPIPRNRGRGRSTSNATSSSADTN
ARKPPPPPPPAAAAESTQNNDRRAAPPPPPASAPPSYSSTPEPDLPATPAAPSDPPAAVA
PPRRFNVPPPPSFMGKNAGAPPPAATPASPTAAAAPPALPGRSLPPSLPSRGSPAPPALP
GRSVPPPPELPGRAVPAPPPSLPARGGTPAAGGPPPPPPPRDGATPLSRPPPPPSRSAIP
PPAAAPTAYTPPPPPAAASPAAAQSSYTPPPPPPPPASSRPVPGVPGGVPPPPPPPPPGP
GPAAAGGPPPPPPPPPGAAPSFGSAAPPPPPGPPPAMSGGPPPPPPPPGDFGVTPGPPPP
PTGDAGRDALLSSITAAGGIGSLKKVDKSQLDRPSVMLQEARGESPTIPSAAPGAPGGGN
SLADALASALNKRKGQVSKSDDESDGDDW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG