YALI0B22088g

Overview

Description some similarities with uniprot|P22470 Saccharomyces cerevisiae YDR143c SAN1 mating-type regulation protein
Locus type CDS
Locus tag YALI0B22088g

Location

Species Yarrowia lipolytica Positions 2891902..2894980
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 3079 (nuc.)
Previous locus YALI0B22066g Next locus YALI0B22110g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B22088g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B22088gYALI0B22088g_mRNA-001YALI0B22088g_CDS-001

Nucleotide sequence

 

>YALI0B22088g
ATGAGCGAAAACAACGGGCCTCCTGATCCGGCCCGGGACGCGGTGGCGCAACTATTGCGG
AGCGCTCTGCGTCGAAATCTGGACGTCCAGCACAACAGAGAGGTGGTTCAGGAGTACATG
GACCGGCTTCTGAATGGAGATGGTACGAACACAGACGCAGCGCCAGGAGACACAAATGCA
GCGACGGAGACAACAGAAGCACCAGCATCGACAGAGGCGGCAAGCGCGACGCCAGCAGAG
ACTTCTTCGACTGCTCCGGGCACACAAACACCCCCTCAACCGCCTCATCGACACATGCCT
CGTGATCGGCCTATCATGTTGGTTACATATTCACTAGGTACAACTCAGGCGCCGCCACCC
GGCACGGCTGACAACACCATCTGGAACCTGGCGACGGAGGCATCGCGACAGGCCCGGGAA
GCCCGTGGACGTGAAGCTAGAGGCCGTGCTGCTGACGGAGGAACCGCACAAGCATACCGA
TCTCGGTCCCAATCGCAACGAAGAGCCGGAGATCGCACCCGGGAACGATCCCCCATGCGT
ACACGGGTCAGTGATGGTGGAGCCGAGGCTGCCAGAGAAACGGCAGCAGCAACCACTGAC
TCCACCGCTGAGCCAGACGAGGCTGGTCACGTGCATCTCAACCAAGCCGCCGGAGGCTGG
TTGAGCAACCCATTGATCCAGCGGCTGCTGCAACGGCGGGCTGCTGGAGAGGATGATGCT
GGAACAGATGCGCCTCCAGACACAGCTGGTGATGCCCCCAACATCACATTCAGTCCCGGA
GGAATCGACCACCGCCCTGATGGCACTACTACGGCTACATTCACTATCCCTACACACATG
TTTGCCGGTGGTGTTCTAGGAGGAGGGCGACACAAGCCCAAGGCATCACGACGGGTGATT
CGCAACCTCGAAACGCTGGAGCTGAGCGAGGTGGTGGAGCAGAACTGTCCGATCTGCTAC
GATGCATTCGAGGAGAAGCCGCTGGGCTGGGACGCTATTATCGCCAAGTTGGCCGAGCAG
GAGAGAAAGCAGGAGGAGGACCGACAGCAAGAGAGTCGAGGGCTGGCGTCGGAGGCCAAC
ACATCCAGTGCATCTGTGTCTTCGGATCCGTCGTTCGATTTCAACCAAGTTAATCCTGCG
ACTTCAGTACACGGTCCAGTGCTCATTGAACTAGCTTCTCCCAGTGAAAGAGCCATTCAG
GCCGAGGCTGACGAGATTATACGGGCTAGAAACGATCCTGGAGTCGAGGAAAACTTGCGC
CAGGCTCTGGACGAGGCTACCAATCAGATTCGGTACATTGTCGACACCCCTGAAGATGCT
GCTGCCTTCAGAGAAGCCAACCCTCAACAGCTGTGTCCTATCATACGTGTGGACCCGGAG
GCAGGTCCACGTCAGCCGTTTGTGATTCCCCGGATCCCCGAGGGTCTACGGGAGGCACAT
GAGGAGGTTGCTTTGCATCGGGTACAACAGCGGGTGATGGAACGGACTGTTGAACGGCAG
TTTGAGCGTCAAACTACGGGTGGAACGACAGAGCGGACGCCGCCAGCTACTGCTGGTACC
TCTTCTACGGGATCCACGTCTGAGACAGGGGCTGAGACAGGGGCAAACGCAGAGTCAAAC
ACAGAGACAGAGACTGAGTCGGAGGCTAACTTCCCTGAGAGTCACGTGGCAACCAAGATG
CCCTGTGGTCACATTTTCGGCCATCTATGTATCTGTGAGTGGTTGCGGTCAAACAACTCG
TGCCCTCTGTGCCGAGTGACCGTTGAGTCCGAGTCCGAATACCTGCAGGCTACCGGTCAG
CCCGACGAGTCTCGGTCTGGCGGCTTCTTCGAGGTCCTCTTCAACGTACTACCTCGTGTT
TTCCAGGAGATTGAGGCAGACCGACGCCGTCACAACAATAGCAACAATCCCCAGGGCCCC
CAGACCGCGCAGGGCGAGATCAACGCCAGCGATATGTTCCGTGGAGTTCCTGCAGCAGCT
AGAGCTACTGGGACAGCTGGTGTAGGTACCATTGACGCCCGACCTCCAGTTGTCGGGCCT
CAAGGGAACGTGCCTCACTTTCTGAGCCGTGGAGTTGAAGGCTGGCCGCAGTTGTTCCAC
GCTCACCGTGTAGAGACTGGCACTGGGCCCACACAGAATCTGCCTCCCGTTGTAGATGTG
ATTCGGGAGTTTCAAACTAACGCCCGAAGAGCGGCTACAGAAGGAGTTGGGGGTGAGACT
GGAGCTGCAGGGAGAACTGGGGCCTCTGGCACGGGAGAAGGTGCTGGCGCTGAACCCCAC
ACTCACAACCACACCCACACACATGCTCACGTGCACCAGCCAGTTCCTGGCATCTACGTC
TATCATCGTCCGTCTGACTTTTTTCGGCTACATGGAGATGCAGGTGAGGGTCCACGGCAA
GAGGCTAACAGAGTTTCAAGCTCTGGGACTGGGAATGTTGGAGCTGCAGGCTCTGCTTCT
TCGCCTGTGGGGCAGGAGACGTTGCAGGCAATCGGGACCGACGGTGGGGACTCCGGCGGC
AGTCGCGACAGCAACGCGGGCAGTAGCACCGACAGCGGGTCTGCGAGTGCCTCCGGCTCT
GGCTCTGGCTCTTCGTCTAGCGGTACTGGAGAAGGACTGCGTAGCCGACTGATGGAGCCT
ATCATGAGGCGCATTTTTCGGTCGCGTGAGCCTGAACGTCATCATCCCTACCGCCGCACC
AGCGGGGGAAATGGGGGTTCTGAGTCTGGGTCCAATTTGGGGTCGGGGTCGGGGTCGGGG
TCGGGGTCGGGGTCGGGCTCTGGATCTGGAGTCGGAAATTAGACGAGATGTGGGAGTATG
GTATGATACGGCTTGCGCAGGAGCACAGAAAACGAAAAAGATGAATAAACAAAGTAGCAT
ATGGTACAAGTACAGTACAAATTCAAGTACTTGCAGTTTACAGGGTTGGAATGAGGGTGT
ATGTACGATACCATACTGGTGTGGCTATGACGTAGGTGCTTGTAGAGGAGTGGTATGTAC
GATACGAGTACAAGTAGTGAATACTCGTACACATTTGGTGCGAGTGGTTTCAGTATCGAG
CTTGGCGAGGGTATATGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B22088g_CDS-001

Protein length: 934 aa.
Product: Conserved hypothetical protein

>YALI0B22088g_CDS-001 MSENNGPPDPARDAVAQLLRSALRRNLDVQHNREVVQEYMDRLLNGDGTNTDAAPGDTNA
ATETTEAPASTEAASATPAETSSTAPGTQTPPQPPHRHMPRDRPIMLVTYSLGTTQAPPP
GTADNTIWNLATEASRQAREARGREARGRAADGGTAQAYRSRSQSQRRAGDRTRERSPMR
TRVSDGGAEAARETAAATTDSTAEPDEAGHVHLNQAAGGWLSNPLIQRLLQRRAAGEDDA
GTDAPPDTAGDAPNITFSPGGIDHRPDGTTTATFTIPTHMFAGGVLGGGRHKPKASRRVI
RNLETLELSEVVEQNCPICYDAFEEKPLGWDAIIAKLAEQERKQEEDRQQESRGLASEAN
TSSASVSSDPSFDFNQVNPATSVHGPVLIELASPSERAIQAEADEIIRARNDPGVEENLR
QALDEATNQIRYIVDTPEDAAAFREANPQQLCPIIRVDPEAGPRQPFVIPRIPEGLREAH
EEVALHRVQQRVMERTVERQFERQTTGGTTERTPPATAGTSSTGSTSETGAETGANAESN
TETETESEANFPESHVATKMPCGHIFGHLCICEWLRSNNSCPLCRVTVESESEYLQATGQ
PDESRSGGFFEVLFNVLPRVFQEIEADRRRHNNSNNPQGPQTAQGEINASDMFRGVPAAA
RATGTAGVGTIDARPPVVGPQGNVPHFLSRGVEGWPQLFHAHRVETGTGPTQNLPPVVDV
IREFQTNARRAATEGVGGETGAAGRTGASGTGEGAGAEPHTHNHTHTHAHVHQPVPGIYV
YHRPSDFFRLHGDAGEGPRQEANRVSSSGTGNVGAAGSASSPVGQETLQAIGTDGGDSGG
SRDSNAGSSTDSGSASASGSGSGSSSSGTGEGLRSRLMEPIMRRIFRSREPERHHPYRRT
SGGNGGSESGSNLGSGSGSGSGSGSGSGSGVGN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG