YALI0B20922g

Overview

Description highly similar to uniprot|P47943 Schizosaccharomyces pombe Eukaryotic initiation factor 4A (eIF-4A) (eIF4A)
Locus type CDS
Locus tag YALI0B20922g

Location

Species Yarrowia lipolytica Positions 2753539..2754831
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1293 (nuc.)
Previous locus YALI0B20911g Next locus YALI0B20936r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20922g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20922gYALI0B20922g_mRNA-001YALI0B20922g_CDS-001

Nucleotide sequence

 

>YALI0B20922g
ATGGCCGACGGACTCACCGACATCGATTCTTCCCAGATCACCACCAACTACGACGAGGTT
GTTACCTCTTTCGACGACCTTGGACTCAAGGACGAGCTGCTCCGAGGTATCTACGGTTAC
GGTTTTGAGAACCCTTCCTCCATTCAGCAGCGAGCCATCCTGCCCGTCATCAAGGGTAAC
GATGTCCTTGCCCAGGCCCAGTCTGGTACTGGTAAGACTGCCACCTTCTCTATCTCTGCT
CTGCAGAACATTGACGAGAAGATTAAGAAGCCCCAGGCTCTGATCATTGCCCCCACTCGA
GAGCTGGCCCACCAGATCCAGAAGGTTGTCCTTGCCTTTGGCGAGTACATGAAGATTGAG
TGCCACGCCTGCATTGGTGGTACCTCCGTCGCCGAGGACATCCGAGTCATCCAGGAGGGT
GTCCACGTCATTGTCGGAACCCCCGGTCGAATCCACGATATGATTGAGCGACGAATCCTC
AAGACCGACCTCATCAAGATGTTCATCCTTGATGAGGCCGATGAGATGCTTTCTCGAGAG
TTCAAGGACCCCATCTACGATATCTTCACCACCCTCCCCGAGACCACCCAGACCGTTCTG
CTGTCTGCCACCATGCCCGCTGAGGTCCTCGACATCACCGGCAAGTTCATGCGAGACCCC
GTCCGAATTCTTGTCAAGAAGGATGAGCTGACCCTTGAAGGTATCAAGCAGTTCTACATT
GATGTTGAGCAGGAGTCCTACAAGTTTGAGGTTCTGTGCGATCTCTACGAGACCATCAAC
GTTTCTCAGGCCGTCATTTTCTGCAACACCCGACGAAAGGTCGACTACCTGACCCAGGCT
CTGACCGAGGCTGACTTCACCGTCTCCTCCATGCACGGTGAGACCGAGCAGTCTCAGCGA
GATGTCATTATGAAGGCTTTCCGAACCGGTTCTTCTCGAATCCTCATCACTACCGATCTG
CTTGCCCGAGGTATCGATGTCCAGCAGGTTTCTCTGGTCATCAACTTCGACCTGCCCTCC
AACCGAGAGAACTACATCCATCGAATTGGTCGAGGTGGACGATTCGGCCGAAAGGGTGTT
GCCATCAACTTCGTCACCTCCGAGGACCACGGTATGCTCAAGGAGCTCGAGCGATTCTAC
TCCACTGAGATCGTTGAGATGCCCACCAACATTGCCGATCTTATTTAAACCGAGCTACCT
TTTTAACCATTGTAGTGAGGCAACTGAGCGCCCCAGTGAGGTTGTTAAAGTAAAAGTAAT
TCAAAATTGAGAATGTTATTAGATGAATAAGTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20922g_CDS-001

Protein length: 396 aa.
Product: Eukaryotic initiation factor 4A (eIF-4A) (eIF4A), putative

>YALI0B20922g_CDS-001 MADGLTDIDSSQITTNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGN
DVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIE
CHACIGGTSVAEDIRVIQEGVHVIVGTPGRIHDMIERRILKTDLIKMFILDEADEMLSRE
FKDPIYDIFTTLPETTQTVLLSATMPAEVLDITGKFMRDPVRILVKKDELTLEGIKQFYI
DVEQESYKFEVLCDLYETINVSQAVIFCNTRRKVDYLTQALTEADFTVSSMHGETEQSQR
DVIMKAFRTGSSRILITTDLLARGIDVQQVSLVINFDLPSNRENYIHRIGRGGRFGRKGV
AINFVTSEDHGMLKELERFYSTEIVEMPTNIADLI*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG