YALI0B20790g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B20790g

Location

Species Yarrowia lipolytica Positions 2736504..2737559
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1056 (nuc.)
Previous locus YALI0B20768g Next locus YALI0B20812g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20790g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20790gYALI0B20790g_mRNA-001YALI0B20790g_CDS-001

Nucleotide sequence

 

>YALI0B20790g
ATGTCCCTGCTACAATCTATCCAGCAAAGCTACCATGCTATCGGAGTGCCCTTCTCTCAG
GCCCTGTCCCGTTTTGAGCCTCAGTATGTGTCCGAGGCCAACTTCGCCATTGACGCCAAC
TGCCAGACGGCCTGCAACTTCGTTACTGCTGATAACTCCACTTTCGAGTCTGTGATTACT
GACTACCGACAGAGCAACACCACCATCGAAGAGCTTCTCCAGGAGTCTTCTACTTCTAAT
GAAGACTTTGCGAAGCTCACTACTGCCGGGTTCGCTAAGTTCCTCCAGTCTGGGCAGCTG
CGTCACTCTCATGCCATGACGCAGATTGTCTCCAAGGACGCAAGAAACGCCACTGTTAAC
GACGGAGGTGACATGGGCGGCGGAGCTGGAATTGACGATCAGGATGGAGACTCTTCCTCC
AGCGCAGCTGGCACTCCTACCACCCTGGCTGTGGCCACTCCTACCTCATCTTCCGAAGTT
TTGGTTCAGAAACTCAAGGAGGAGCTGAGACAAGCGCTGAGTGACCTTTTTGAGCCTTAC
GATTATTCACAGCTGGGTCTGTCTATGACAAACGGAGACACCCAGGCTACCGGTGGTCCT
CTTTCTGTCGGCTATCACAAGCGATCAGACACCTTCCGACTCCACTTTGCTACCCGAGAC
GTGAAGGGCTACCAGAACGGAGTTAAGATGGTCATTTCTCCGATTCGAGACGACCAGAGC
GCCTATGACAAGCTCAAGAACTGGGAGGAAGGCATGATCAAAGGCATCCAGCAGGCATTG
GACCTCTATGCTTCCAAGGGAGATGTCATTGTGGGTGCTTTCACGGACGACAACAAAACC
CCGTGGGGCGCCTACTCTATTCGAGGAGATTCTGGAGATTTTACCGATGCGTGGGAGCAG
CCTAGCTTCTGCGGGGCTCTCTCTGTTACCTTCTGCCAGTGCGGAGGTAACTGCTCCTTG
TAAAAACTTTTCACTCTCAATGCCTAATGACCATTTTAGATTCCTTGTATCACACCAAAC
CCATCTCTATAGCATCAAATAAATCTTACTACTAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20790g_CDS-001

Protein length: 321 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B20790g_CDS-001 MSLLQSIQQSYHAIGVPFSQALSRFEPQYVSEANFAIDANCQTACNFVTADNSTFESVIT
DYRQSNTTIEELLQESSTSNEDFAKLTTAGFAKFLQSGQLRHSHAMTQIVSKDARNATVN
DGGDMGGGAGIDDQDGDSSSSAAGTPTTLAVATPTSSSEVLVQKLKEELRQALSDLFEPY
DYSQLGLSMTNGDTQATGGPLSVGYHKRSDTFRLHFATRDVKGYQNGVKMVISPIRDDQS
AYDKLKNWEEGMIKGIQQALDLYASKGDVIVGAFTDDNKTPWGAYSIRGDSGDFTDAWEQ
PSFCGALSVTFCQCGGNCSL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG