YALI0B20592g

Overview

Description weakly similar to uniprot|P38770 Saccharomyces cerevisiae YHR036w
Locus type CDS
Locus tag YALI0B20592g

Location

Species Yarrowia lipolytica Positions 2716304..2717664
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1361 (nuc.)
Previous locus YALI0B20570g Next locus YALI0B20614g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20592g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20592gYALI0B20592g_mRNA-001YALI0B20592g_CDS-001

Nucleotide sequence

 

>YALI0B20592g
ATGTCATTTGCAGAAATGAGTATCGACGAAGCGCCCGACGACGAGCCTCTGGTGACCGGA
TTCAGTGGCTTCACGTTATCTGACCAGGATGTCCGGAACCGTCAGTTACAATACCACCGA
CCCTTGCAGCAACAACAACCGTTTGACGATCTGACCTCGGAGTTCTCCAATCTGCGAACT
AGCGAGACCCAAGACCCCGACGAAATGGACATTGACGACCCCACGGATCTTCTTGACCTT
CAATCTGTCAACCTATCGCGCATGAACCCCGAGTTCCTTCCGCCTGTGTCTACACCCATC
AAGGCAGGTAAGAGAAGAACTTCCTCGGTGTCAGTTGCTGCTGCGGCACCCAACTCGCCA
TGGAAGATCTCATCTGTGTTCAATCCCACTGAACTCGGTGCCCAGTTTGCTGTCAAGGAG
ATTGAGAAGAATGAAGACGTGGATATGAGCATGGTCCTCTACTCCCCTGTCAATGAAGGT
AAACCCCTTGATCAGGCAGACGATATCGATCCCGATCTTCGACCAGACGCTAAACACGGC
GACTTCTCTCCTCAATCTGCCCAGGCAGCAGTACACACTCCAGCACCAACTCTTCACACT
TCCGAGGCTCAAAGCCCGGGGCAGGATCAGTCTGCAGAATACCACCTTCATCTGCCCAAC
CCAACCCTTGGATGGATGATTCAAAACCCCAACCTGCCGTACATCATTACCTCGTATCTA
CAGCTCGCGTTCAACGGCATCATGCTGGCCGTCATGGCCTACGTGGTCTACTTATTTATT
TCCTCGGTCCGACAGGACGTTGGTTTCAAGTTCTCAGCTCATTCGGGCGAGATCCTTATG
GCAAAAAGCAAGTGTGCAAAGCTGTACCTGCTTAACGAATGTGCAGCCAACTCCCGCCGT
CCAGCTCTGGAGACTCTCTGTGACCAATGGGAACTGTGCATGAACAGAGACGAACATGCC
GTTAACCGAGCCCGTCTCGGAGCCGAAACACTGGCCGAAATCATCACGGGGTTCATTGAC
AGATTCTCATACAAGGCCTTGGGGCTCATTTCACTGCTTTTCCTGGGGTCCATGTTTGTG
TCCAATTTTGCATTTGGCTTCTTCAGAGCAAAAGCATACTATAATGGAGAAGTGGAGAAA
CAGAATGGCCTCTGGGATAAAGCAAGATACACTTGGGGAGGGAGGAAAGAAGATGAACCG
AAACGACTCGTCTTTGGTCAACAGAATGTTCTCCAAAACTAGCTTCTCTGATACCATTGC
TACAAGTAGCTATAGTAACAGTATGTACATTACAGTGGGCCGAGCCACCTTATTGTTCTC
ACAGGTAATTCAACACGAAACACACCCAGTCTTTCTGTAAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20592g_CDS-001

Protein length: 414 aa.
Product: Conserved hypothetical protein

>YALI0B20592g_CDS-001 MSFAEMSIDEAPDDEPLVTGFSGFTLSDQDVRNRQLQYHRPLQQQQPFDDLTSEFSNLRT
SETQDPDEMDIDDPTDLLDLQSVNLSRMNPEFLPPVSTPIKAGKRRTSSVSVAAAAPNSP
WKISSVFNPTELGAQFAVKEIEKNEDVDMSMVLYSPVNEGKPLDQADDIDPDLRPDAKHG
DFSPQSAQAAVHTPAPTLHTSEAQSPGQDQSAEYHLHLPNPTLGWMIQNPNLPYIITSYL
QLAFNGIMLAVMAYVVYLFISSVRQDVGFKFSAHSGEILMAKSKCAKLYLLNECAANSRR
PALETLCDQWELCMNRDEHAVNRARLGAETLAEIITGFIDRFSYKALGLISLLFLGSMFV
SNFAFGFFRAKAYYNGEVEKQNGLWDKARYTWGGRKEDEPKRLVFGQQNVLQN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG