YALI0B20570g

Overview

Description weakly similar to uniprot|P38678 Neurospora crassa Glucan synthase-1
Locus type CDS
Locus tag YALI0B20570g

Location

Species Yarrowia lipolytica Positions 2714099..2716311
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 2213 (nuc.)
Previous locus YALI0B20559g Next locus YALI0B20592g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B20570g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B20570gYALI0B20570g_mRNA-001YALI0B20570g_CDS-001

Nucleotide sequence

 

>YALI0B20570g
ATGAACTCGTTCTTCAACTCCGTGTCGGATTTCATCCACTCGGTCACAACCCCAGACAGA
TACGCGTCGCAACAGCGATCGTCAAAGGCGTCACAAAGCGCCGGCGCAAACTCCCAGAAC
AGACCGCTCTACAACAATGACGACAACCAGAGTGAAATGTACCAGGCTTCCTCCTCGTAC
ACTGGAGGGTACACAAACTCCCCTTCGGCGTCGTCGTCCAATCTCGCCGGAGGAGCCGCT
GCTGACAGAGCCAACCCCTACAGCTCCCGTAACAACTCGACCACCAACTTCTCGGCCTCA
TCCACGTCGGTCAATAAGGCTCCCTACGCTCCTGGATCACGGTCGTCCGCAATTGGAAAC
AATGACCCCGCAGGAGTCACCCGAGACTCACACGAATTGCAGGAGTACGTTGACGGTCAG
CCGCCGGCTCCTTCGGTGGCCATGTCATGGGAGCGAATCGACAAGTGGGCTGACGAACAC
TACCCCGAGCTCAACGATCAGCTCTGCTACCCTGCCACCGCCTCCGATCTCAACGAACTG
GAGGCCGATCTCGACTGTTCCCTTCCCCTGGATGTTCGAGACTCGTGTCTGATTCATGAC
GGCCAGGAGAAGTTTGGCCGACCCTCAGGCATCATCTTCGGCATCACCCTGCTCGATCTC
GAGACCATTGCCGAGGAGTGGTACTCGTGGAAAAAGGCCGCCATCCGAATCAACCGGGAG
ATTGCTCGGGCCACCGGCCAGACCCCCACTAAGCAGGGCGGCATCTTCATCAATCCCAAC
GCCGGCTCTCCCAACTCTTCCACCCCCGGTTCCCCCGTGGCCTCTGTGGCCCGACAAAAG
AACATCAGCTCATGGCTCGCGTCGCAGGACTCTGTCCCCGAGGGAGCCGTCCAGCTGGTT
TATGCACACCCCGGCTGGATCCCTCTGGCCAACGATCGAGCCGGAAACAACATTGCTGTC
GATCTGGCACCTGGCAAGAAGGGGAAATGGGGTCAGGTGATTCTGTTCGGTCGGGAGTTT
GACCGAAAATACGTGGTGGCCCAGTCGTGGGCTCACTTCCTGGCCATGGTCGCCGATGAC
TTTGACCGGGGCAACTGGGAAGTTGACCACGACACTGAGGAGCTGTGGTTCAAGACCGAC
CGAGGCACATTTGTTAGCTACTTCACTGTACTCAAGACCCGAGTGGAGCGACAGTTCCGA
CACCAGATGCAGCGACGGGAACATGAGCGACGACAGGCCGCTGCCGCCGCTCAGCAGCAG
CAGCAGCAGCAGCAACATCACGCACAGGGAGGCCTCCACTCTCCCTCACCACAGCATACA
CAGAGCATGCCAGCCCCTGGCCTGGGCAAGCCCCTGACCTCTAAGCCGGCCCAGGATTTG
GACATCGTCGACCTCAACGAGGACACTGCCACCATTAAGGACAAGGGCAAGGCTACTATG
GGCTCTGCTCTCCGAAAGACTATTGTTGACGAGAGCAAGACTGCTCACACAATTGTGGAG
CCTCTTGAGGAGTCTGAGGAGATCAAGGGCAAGGGCAAGGGCAAGGAGGAGGATGTCAAC
GAAGCCGCCGAAAAGGCCAAGGTGGAGGCCACCGAGAAGACCAAGAAGGCTGCCAAGGAA
GCTGCTGATAAGGAAGCAGAGCTCAAGAAGGCCGCCGAGAAGGCCGCTGAGGAGAAGGCC
AAGGCTGAGAAGAAGGCTGCTGAGGCTCGAGAGAAGGAGGAGAAGGAGGCCAAGGCTGCC
GCCAAAGCCAAGGAGGAGGAGCTCAAGAAAGAGGAGGTAGCTAAGGCTGCCGCCAAGGCT
GAAGAGGAGCAGAAGGCCACCGCTGCCGCTGAGGCTGCCAAGGCTGAGGCTAAGCGAGCT
GCTGAGGCCGACGCTTCCAAGAAGGTAGAGGCCGAGAAGGCTGCCGCTGAGGAGTCTAAG
GAGTCTAAGGCTGAGTCTGAGGAGAGCAAGGTCGAGAGGGATCTCGAGGAGCTCAAGATT
GACGAGGAAAACGGTAATGCCGAGGAGGCCGATGAGGAGGCCGATGACGATGATGAAGAT
GACGAGGAGGAGGGTGACAGCAAGGAGGGTGAGGAGACCAAGAGCACAACCGCCTCAAAG
TCCAAGTCCAAGAAGAAGAATAAGAAGAAGGGCAAGAAATAATGTATGTATGCATAACTT
TTTGATGATGCTGTAAGATATTCAGAAAATATAAAAAAAGTGTTTGTTACAGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B20570g_CDS-001

Protein length: 714 aa.
Product: Conserved hypothetical protein

>YALI0B20570g_CDS-001 MNSFFNSVSDFIHSVTTPDRYASQQRSSKASQSAGANSQNRPLYNNDDNQSEMYQASSSY
TGGYTNSPSASSSNLAGGAAADRANPYSSRNNSTTNFSASSTSVNKAPYAPGSRSSAIGN
NDPAGVTRDSHELQEYVDGQPPAPSVAMSWERIDKWADEHYPELNDQLCYPATASDLNEL
EADLDCSLPLDVRDSCLIHDGQEKFGRPSGIIFGITLLDLETIAEEWYSWKKAAIRINRE
IARATGQTPTKQGGIFINPNAGSPNSSTPGSPVASVARQKNISSWLASQDSVPEGAVQLV
YAHPGWIPLANDRAGNNIAVDLAPGKKGKWGQVILFGREFDRKYVVAQSWAHFLAMVADD
FDRGNWEVDHDTEELWFKTDRGTFVSYFTVLKTRVERQFRHQMQRREHERRQAAAAAQQQ
QQQQQHHAQGGLHSPSPQHTQSMPAPGLGKPLTSKPAQDLDIVDLNEDTATIKDKGKATM
GSALRKTIVDESKTAHTIVEPLEESEEIKGKGKGKEEDVNEAAEKAKVEATEKTKKAAKE
AADKEAELKKAAEKAAEEKAKAEKKAAEAREKEEKEAKAAAKAKEEELKKEEVAKAAAKA
EEEQKATAAAEAAKAEAKRAAEADASKKVEAEKAAAEESKESKAESEESKVERDLEELKI
DEENGNAEEADEEADDDDEDDEEEGDSKEGEETKSTTASKSKSKKKNKKKGKK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG