YALI0B19998g

Overview

Description similar to uniprot|Q12680 Saccharomyces cerevisiae YDL171c GLT1 glutamate synthase (NAPDPH) (GOGAT
Locus type CDS
Locus tag YALI0B19998g

Location

Species Yarrowia lipolytica Positions 2626221..2633187
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 6967 (nuc.)
Previous locus YALI0B19987r Next locus YALI0B20020g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19998g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19998gYALI0B19998g_mRNA-001YALI0B19998g_CDS-001

Nucleotide sequence

 

>YALI0B19998g
ATGGATCACGAAGAACAACAAGAAGTGAGTAATGGAGGACGACGAGTTTTTGGATGGTGG
TGGCGATATTTTGCTATTGATTTTGTTACTGTGGTTTAGGTGGCTTTAGTGCACTCCGTT
CACTATCTGTGTGACTAGTTTCGCTTAGCTTATCGTTGGATTCGCTTAAGCGTGGTGACG
CAGGTTAAGGTTGTGAAAGGAGAGGGAACTCAGAGTGAGAGGGTGGAGTGGAAAAATGGG
TGATCCGATGACAAGATACGTATTAGAGACAGACGCGTGTTCAGAGATGCAGCGATCTCG
GAGCTACGACTCTTCCAATGGCGTGAATGAGTCGTTTTATTCAATTTTCATTTGCCACTA
TCTCCCCTCTTTTCCCTTGGCATGCACTACTGCATTTCAAGGACCACTTGTCGCACCAAT
CAAAACCACACCATAGAAATCAGGTAGATAGACGAGCAGAGAAAATAACTCGGCGACATG
GGTCATGCTTCAAGCAAAACCGTCCCAGAAACTGATCTCTAGCAAGCCGCTATACTCTAG
TATTCCTCGTTCCAAACTAACAAAGTACAACCCCATCTCATACAACGAGAACAATGGCTC
GTGGGCAGGCGCGCTCCCCACCAAACAGGGCCTGTACGACCCCGAGTACGAAAAAGATGC
CTGTGGTGTCGGTTTTGCCTGTAACATCAAGGGCCAACAATCGCACAAGATCATTTCCGA
CGCCAAGAATCTGCTCTGCAACATGACCCACCGAGGAGCCGTGGGATCCGACGCACGAGA
CGGAGATGGAGCAGGAGTCATGACCTCCATCCCCCACAAGTTCATCAAAAAGGAGTTTAA
GCGGCTCTACGACTTCGAGCTGCCTCCCATGGGTCAGTACGCCTGCGGTAACCTCTTCTT
CAAAAACGACCAGGACGTGCTGGCGAAGTCCAAGGACACGTTTGAGTCCATTGCCAAGTC
TCTGGGCCTTGAGGTGCTCGGCTGGCGATTCGTCCCCCGAGACTCCTCTATTCTTGGTCC
CGCTGCTCTGTCTCGAGAGCCTCTGATCCTGCAGCCGGTGGTTGTGCTGTCTGAGGCCTT
CAAGTCAGGCCCTCACACTGAGGACGAATGGGACTCCAAGTTCGAGAAGCTGTTTGAGTT
GCAGCTTTACGTGCTCCGAAAGCAGTCCACTCACACCATTGGTTTGCACAACTGGTTCTA
CATTTGTTCGCTGTCGAACAAGAACATGGTCTACAAGGGCCAGCTTGCTCCCGTCCAGGT
CTACAACTACTACTACGATCTGCTCAACGTCGACTACGAGGGCCACTTTGCTCTGGTCCA
CTCGCGATTCTCCACAAACACTTTCCCCTCTTGGGACCGAGCCCAGCCTCTGCGATGGGC
CGCACACAACGGTGAGATCAACACCCTGCGAGGAAACAAGAACTGGATGCGAGCCCGAGA
GGGAATGATGAAATCTGGTCTGTTTGGAGACGAACTTGAGCGACTCTACCCCATTGTCGA
GGAGGGAGGATCCGATTCCGCTGCCTTTGATAACGTCCTTGAGCTGCTGGTCATCAATGG
TGTCCTGTCCATGCCCGAGGCCGTTATGATGATGATTCCAGAGGCCTGGCAGAACAACAC
CACCATGGACTCCAAGAAGCGAGCTTTCTACGAGTGGGCTGCTTGCCTTATGGAGCCCTG
GGACGGCCCTGCTCTTTTCACTTTTGCCGACGGACGGTACTGTGGTGCTAACCTCGATCG
AAACGGTCTACGACCCTGCCGATACTACATCACCGACGACGACCGAATGATCTGTGCCTC
TGAGGTGGGTGTCATTCTGATCGAGTCCGAGAAGGTGATCCAGAAGGGCCGACTCCGACC
AGGACGAATGCTGCTGGTTGATACCAAGGAGGGACGAGTCGTTGATGACCGAGAGCTCAA
AAAGAAGATTGCTGGCCGAGTGGACTTCAAGTCGTGGATCCACGCCAACGTCATCACCAT
GGAGGACATGCGACAGAAGGTTGAGTCCAAGATGCCCTCCATTCTCGAGGTCAAGATCGA
CGAGCTCTCTGTCCAGAGCGATCCCCGTCTCCCTGCGTTCGGATACACTGCTGAGCAGCT
TTCTCTGCTGCTGGCACCCATGGCTGCCACTGCCAAGGAGGCTCTTGGATCTATGGGTAA
CGACGGACCTCTGGCTTGCCTCGCAAAGCAGCCCAAGGTGCTGTTTGACTACTTCCGACA
GCTGTTTGCTCAGGTCACTAACCCTCCCATCGATCCCATTCGAGAGGCTATTGTCATGTC
CCTGGAGTGCTACGTTGGACCCCAGGGTAACGTGCTTGAGATGAACCCCAGCCAGTGCAA
CCGTCTGCTGCTTCCCTCTCCTATTCTGACCATCCAGGAGACTGCAATGCTGCACGAGAT
GCACAGACACTACCCCAAGTGGACCACAGATACCATTGATATCACTTTTGACAAATCTGA
GGGCCCCGCTGGCTACCTGAAGGCTCTTGACAGAATCTGTGAGGAGGCCTCCAACTCCAT
CCACGCCAAGCACCAGATCATCATCCTATCCGACAAGAAGACTTCTGCTGACCGAGTCCC
TGTCTCTTCTGTTGTGGCCTGTGGTGCTGTTCACCACCACCTTGTGCAGCAGAAGCAGCG
ATCTCGAGTTGCCCTGATTGTCGAGACTGCCGAGGCCCGAGAGGTACACCACTTCTGTGT
TCTGCTCGGATACGGCGCTGACGCTATCAACCCCTACTTGGCTATCGAGACCCTTGCCAA
GATGAACCGGGAGGGTCTTATCAAGGAACCTCTTTCTGACGACCAGATTGTGGCCAACTA
CAAGACAGCCGTTGACGGCGGTATTCTGAAGGTCATGTCCAAGATGGGTATCTCTACTCT
CGCGTCTTACAAGGGTGCCCAGATCTTTGAGATTCTTGGTATCGACAACTCTGTAGTCGA
CAAGTGCTTCGCCGGTACTGCTTCGCGAATCAAGGGTATCACCTTTGACTTCATTGCAGA
GGATGCCATTGCCCTTCACGAGCGAGGTTTCCCCTCGCGAGAGACTGTCAAGACCAAGTC
TCTGCCCGAGTCTGGAGAGTACCACTACCGAGATGGTGGAGACCCCCACGTCAACACCCC
CGTTGCCATCTCGAACATCCAGGATGCTGTTCGAAACAAGAACGAGAAGGCTTATGAGGC
TTACTCTAAGGCCGAGTACGAAGCCATCAAGGACTGTACTCTCCGAGGTCTGCTTGATTT
CGACTTCGATGCCGCTACCCCTGTCCCCATTGATCAGGTTGAGCCCTGGACCGAGATTGT
TCGACGATTCGTCACTGGTGCCATGTCCTACGGTTCCATCTCAATGGAGTCCCATTCTAC
TCTTGCCGTTGCCATGAACCGACTTGGTGGTAAGTCCAACACCGGTGAGGGTGGTGAGGA
CCCCGAGCGATCCGCTGTTGCTGAGAATGGAGACACTATGAGATCTGCCATCAAGCAGAT
TGCCTCTGGTCGATTTGGTGTCACTTCGTACTACCTTTCTGACGCCGATGAGCTCCAGAT
CAAGATGGCTCAGGGTGCCAAACCCGGTGAGGGTGGTGAGCTTCCCGGACACAAGGTGTC
TGAGCAGATTGGTAAGACTCGACACTCCACTCCTGGTGTCGGTCTCATTTCTCCTCCTCC
CCACCACGACATTTACTCTATTGAGGATCTCAAGCAGCTTATCTACGACCTCAAGTGCTC
TAACCCTCGATCTCGAGTCTCTGTGAAGCTGGTGTCCGAAGTCGGTGTCGGTATCATTGC
CTCCGGTGTTGCCAAGGCTAAGGCTGACCACATTCTCATTTCTGGTCACGATGGTGGAAC
TGGTGCCTCTCGATGGACCGGTATCAAGTACGCCGGTCTCCCCTGGGAGTTGGGTCTTGC
TGAGACTCACCAGACTCTGGTTCTGAACGATCTGCGAGGTCGAGTCACTGTCCAGACCGA
TGGTCAGATCCGAACCGGTCGAGATGTTGCCATTGCCTGTCTTCTCGGAGCCGAGGAGTG
GGGATTTGCTACTACTCCTCTCATTGCCATGGGCTGCATCATGATGCGAAAGTGCCATCT
CAACACTTGTCCCGTCGGTATTGCCACCCAGGACCCCGAGCTGCGACAGAAGTTCAAGGG
TACCCCCGAGCATGTGATCAACTTCTTCTACTACATTGCCAATGAGCTTCGAGGAATCAT
GGCTCAGCTTGGATTCCGAACCATTGACGAGATGGTTGGCCACGCCGAGATGCTGCGAGT
CCGAGACGATCTTCGAAACCACAAGACCAAGAACCTGGATCTGACTCCCATTCTCACTCC
TGCTCACACCCTTCGACCTGGTGTTGCTACCCGAAAGGTTCGAAAGCAGGACCACCGACT
CCATGTCCGACTCGACAACAAGCTCATTGACGAGGCTGAGGTCACTCTGGACAAGGGTCT
TCCCGTCACCATTGACTGTGACATCATCAACACTGATCGATCTCTTGGTTCCACACTCTC
CTACCGAATCTCCAAGCGGTTTGGTGAGGCTGGACTGCCTGACGACACTGTTCACGTCAA
TGTCAAGGGTTCTGCGGGTCAGTCGTTTGGTGCCTTCCTGGCACCCGGTATCACTCTGGA
ACTGGAGGGAGACTGTAACGATTACGTTGGTAAGGGTCTTTCTGGAGGCCGAATCGTCGT
CTATCCTCCCAAGAACTCTGTTTTCAAGGCTGAGGAGAATATCATCGTTGGTAACACTTG
TTTGTACGGTGCTACTTCCGGTACTTGTTTCTTCCGAGGTGTTGGTGCCGAGCGTTTCGG
TGTCCGAAACTCCGGTGCCACTGCCGTTGTTGAGGGCTGTGGAGACCACGGCTGCGAGTA
CATGACTGGAGGTCGTGTTGTTGTTCTCGGCTCCACTGGCCGAAACTTTGCCGCCGGTAT
GTCTGGTGGTATTGCCTACGTGCTTGACATGGGCCAGGAGTTTGTCAACAACGTCAACTC
CGAGACTGTTGAGCTGGGCCCTGTCTCTGATCCCCAGGAGATTGCTTTCCTGCGAGGCCT
GATTGAGGACCACCGACACTACACCGGTTCCGAGCTGGCTGACCGAGTTCTCACAGACTT
CAACCGAATCTTGCCCCGGTTTGTCAAGGTACTGCCCACCGATTACGCTCGAGTTCTGGA
GGAGCAAGCTGCCAAGGTTGCTGAGGCCAAGAAGCGAGAGGTCTCTGGCTACATGCATGC
CATCAAGGAGGACCCTGACGCCGACATCACCAACGGTGAGCTCAAGCGAGCTGCTACCCC
CAAGCCTTGTGCCACTCCTCGGTCCCGAAAGGAGCCTCCTGTTCAGGATCTGGAGGACGC
CATTCTCGACCACAACGCCACAAAGGCCAAGGCTTCCAAGCTGGTCAAGCTCGATAAGAC
CCGAGGTTTCATGAAGTACACTCGACGTGCTGAGAAGTATCGAGATGCCAAGAACCGAAC
CAAGGACTGGGACGAGATGAACACCCGACTGACCAAGGAGGAGCTGAAGTATCAGACTGC
CCGATGCATGGACTGTGGTGTCCCCTTCTGCCAGTCTGACACTGGATGCCCTATTTCCAA
CGTCATCCCCAAGTGGAACGAGCTCGTGTTCCAGGACCGATGGCAGGATGCTCTCGACAG
ACTTCTGATGACCAACAACTTCCCCGAGTTCACTGGACGAATCTGTCCCGCTCCTTGTGA
GGGTGCCTGTGTTCTGGGTATCAACGAGGACCCTGTTGGTATCAAGTCCATCGAGTGTGC
CATTATCGATCACGGTTTCGAGCAGGGCTGGATTAAGCCCAAGCCCCCCGCCACTCGAAC
TGGTAAGACCATTGCCATTATTGGTTCTGGTCCTGCGGGTCTGGCTGCTGCCGATCAGCT
CAATAAGGCAGGCCACTCTGTGACTGTCTACGAGCGAGCTGACCGAATTGGAGGTCTCCT
CATGTACGGTATCCCCAACATGAAGCTGGACAAGCGGGTTGTTGAGCGACGAGTCCAGTT
GATGCGAGACGAGGGTGTCACTTTTATTACCAACACCGAGGTCGGTGAGGACAAGGAAGT
TTCTGTGTCTGGTCTGCGAGCTGACAATGATGCTGTCGTTCTGTGTGTCGGATCCACCAT
TCCTCGAGACTTGCCCATCAAGAACCGATCTCTCAACAACATCAATTTCGCCATGCAGTT
GCTCCGATGGAACACGAAGTCTCTGCTTGACGGTGACATGGATGAGGTTCGAGAGTCCCT
CAAGGACAAGCACGTTGTTGTCATTGGTGGTGGAGACACTGGTAACGATTGTCTGGGTAC
TTCTACTCGACACGGAGCGAAGTCCGTCACCAACTTCGAGCTGCTTCCACGACCTACCCC
TGCTCGACCCAAGGACAACCCCTGGCCCCAGTGGCCTCGAATCTTCCGAGTCGACTATGG
TCACACTGAAGTGGCTGCTCACTACGGCAAGGATCCCCGAGAGTACGGTATCCTGTCCAA
GGAGTTTGTTGACGACGGAGAGGGCAATGTCAAGGGTATCAAGACTGTTCGAGTTGAGTG
GAAGCAGTCTGAGTCTGGCGCCTGGCAGATGAGCGAGATTCCCGGCTCTGAGGAGTTCTT
CCCCGCCGACGTGGTTCTGCTGTCCATGGGTTTCGTTGGTCCCGAGGCCCAGGAGCTCGC
TGCTGAGCGAGACGGACGAGGAAACATCAAGACTCAGACCGGCGATGTCAAGGATCTTGG
ACTCTACAAGGTCCAGGACAACCTGTTCACTGCCGGTGACTGTCGACGAGGACAGTCTCT
GGTTGTCTGGGGTATCCAAGAGGGTCGACAGTGTGCTCGAGCTGTTGATCACTTCCTTAT
GGGATGCACTCGACTGCCCGGTAACGGTTCCATTGAGCAGCGAGATCTCAAGCTCAAATA
GATGGATCGTGAGGAGGATGTGAAGGATTTTGTTTATTATTATTAATTGATTGTATCTTA
TTATGTT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19998g_CDS-001

Protein length: 2120 aa.
Product: NAD(+)-dependent glutamate synthase (GOGAT), putative

>YALI0B19998g_CDS-001 MDHEEQQEYNPISYNENNGSWAGALPTKQGLYDPEYEKDACGVGFACNIKGQQSHKIISD
AKNLLCNMTHRGAVGSDARDGDGAGVMTSIPHKFIKKEFKRLYDFELPPMGQYACGNLFF
KNDQDVLAKSKDTFESIAKSLGLEVLGWRFVPRDSSILGPAALSREPLILQPVVVLSEAF
KSGPHTEDEWDSKFEKLFELQLYVLRKQSTHTIGLHNWFYICSLSNKNMVYKGQLAPVQV
YNYYYDLLNVDYEGHFALVHSRFSTNTFPSWDRAQPLRWAAHNGEINTLRGNKNWMRARE
GMMKSGLFGDELERLYPIVEEGGSDSAAFDNVLELLVINGVLSMPEAVMMMIPEAWQNNT
TMDSKKRAFYEWAACLMEPWDGPALFTFADGRYCGANLDRNGLRPCRYYITDDDRMICAS
EVGVILIESEKVIQKGRLRPGRMLLVDTKEGRVVDDRELKKKIAGRVDFKSWIHANVITM
EDMRQKVESKMPSILEVKIDELSVQSDPRLPAFGYTAEQLSLLLAPMAATAKEALGSMGN
DGPLACLAKQPKVLFDYFRQLFAQVTNPPIDPIREAIVMSLECYVGPQGNVLEMNPSQCN
RLLLPSPILTIQETAMLHEMHRHYPKWTTDTIDITFDKSEGPAGYLKALDRICEEASNSI
HAKHQIIILSDKKTSADRVPVSSVVACGAVHHHLVQQKQRSRVALIVETAEAREVHHFCV
LLGYGADAINPYLAIETLAKMNREGLIKEPLSDDQIVANYKTAVDGGILKVMSKMGISTL
ASYKGAQIFEILGIDNSVVDKCFAGTASRIKGITFDFIAEDAIALHERGFPSRETVKTKS
LPESGEYHYRDGGDPHVNTPVAISNIQDAVRNKNEKAYEAYSKAEYEAIKDCTLRGLLDF
DFDAATPVPIDQVEPWTEIVRRFVTGAMSYGSISMESHSTLAVAMNRLGGKSNTGEGGED
PERSAVAENGDTMRSAIKQIASGRFGVTSYYLSDADELQIKMAQGAKPGEGGELPGHKVS
EQIGKTRHSTPGVGLISPPPHHDIYSIEDLKQLIYDLKCSNPRSRVSVKLVSEVGVGIIA
SGVAKAKADHILISGHDGGTGASRWTGIKYAGLPWELGLAETHQTLVLNDLRGRVTVQTD
GQIRTGRDVAIACLLGAEEWGFATTPLIAMGCIMMRKCHLNTCPVGIATQDPELRQKFKG
TPEHVINFFYYIANELRGIMAQLGFRTIDEMVGHAEMLRVRDDLRNHKTKNLDLTPILTP
AHTLRPGVATRKVRKQDHRLHVRLDNKLIDEAEVTLDKGLPVTIDCDIINTDRSLGSTLS
YRISKRFGEAGLPDDTVHVNVKGSAGQSFGAFLAPGITLELEGDCNDYVGKGLSGGRIVV
YPPKNSVFKAEENIIVGNTCLYGATSGTCFFRGVGAERFGVRNSGATAVVEGCGDHGCEY
MTGGRVVVLGSTGRNFAAGMSGGIAYVLDMGQEFVNNVNSETVELGPVSDPQEIAFLRGL
IEDHRHYTGSELADRVLTDFNRILPRFVKVLPTDYARVLEEQAAKVAEAKKREVSGYMHA
IKEDPDADITNGELKRAATPKPCATPRSRKEPPVQDLEDAILDHNATKAKASKLVKLDKT
RGFMKYTRRAEKYRDAKNRTKDWDEMNTRLTKEELKYQTARCMDCGVPFCQSDTGCPISN
VIPKWNELVFQDRWQDALDRLLMTNNFPEFTGRICPAPCEGACVLGINEDPVGIKSIECA
IIDHGFEQGWIKPKPPATRTGKTIAIIGSGPAGLAAADQLNKAGHSVTVYERADRIGGLL
MYGIPNMKLDKRVVERRVQLMRDEGVTFITNTEVGEDKEVSVSGLRADNDAVVLCVGSTI
PRDLPIKNRSLNNINFAMQLLRWNTKSLLDGDMDEVRESLKDKHVVVIGGGDTGNDCLGT
STRHGAKSVTNFELLPRPTPARPKDNPWPQWPRIFRVDYGHTEVAAHYGKDPREYGILSK
EFVDDGEGNVKGIKTVRVEWKQSESGAWQMSEIPGSEEFFPADVVLLSMGFVGPEAQELA
AERDGRGNIKTQTGDVKDLGLYKVQDNLFTAGDCRRGQSLVVWGIQEGRQCARAVDHFLM
GCTRLPGN


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG