YALI0B19976g

Overview

Description highly similar to uniprot|O93968 Candida boidinii Formate dehydrogenase
Locus type CDS
Locus tag YALI0B19976g

Location

Species Yarrowia lipolytica Positions 2623632..2624802
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1171 (nuc.)
Previous locus YALI0B19932r Next locus YALI0B19987r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19976g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19976gYALI0B19976g_mRNA-001YALI0B19976g_CDS-001

Nucleotide sequence

 

>YALI0B19976g
ATGAAGGTCCTTCTTGTTCTCTACGACGCCGGCTCCCACGCCAAGGATGAGCCCAAGCTA
CTTGGATGCACTGAAAACGAGCTCGGTATCCGAGACTGGCTCGAGTCCCAGGGCCATACC
CTGGTAACTACCTCTTCTAAGGATGGCGCCGACTCCGTTCTCGACAAGGAGATTGTTGAT
GCCGATGTTGTCATCACTACCCCCTTCCATCCCGGTTACATCAACAAGGAGAGAATTGAC
AAGGCCAAGAAGCTCAAGATCTGTATCACTGCCGGTGTTGGTTCTGACCATGTCGATCTA
GATGCCGCCAACGCCCGAGACATTGCTGTCCTTGAAGTCACTGGCTCCAACGTTCAGTCG
GTCGCTGAGCATGTTGTCATGACCATGCTTGTTCTGGTCAGAAACTTCGTCCCTGCTCAT
GAGCAGATCATTTCTGGTGGCTGGGACGTTGCCGCTGTCGCCAAGGACTCTTACGACCTA
GAGGGTAAGGTCATTGGTACAGTTGGAGGTGGGCGAATCGGTCAGCGAGTCCTCAAGCGA
TGCAAGCCCTTCGACCCCATGGAGATGCTCTACTACGACTACCAGCCCATGCCCGCTGAT
GTCGAGAAGGAGATTGGCTGTCGACGAGTGGAGTCTCTCGAGGAGATGCTCTCTCTCTGT
GACGTTGTCACCATCAACTGTCCTCTGCACGCCTCCACCAAGGGCCTCTTCAACAAGAAG
CTCATCTCCCACATGAAGGATGGCGCCTGGCTCGTCAACACCGCTCGAGGAGCTATTTGT
GTCACTGAGGACATTGTTGAGGCTCTCGAGTCCGGAAAGATTCGAGGCTACGGTGGTGAT
GTCTGGTTCCCTCAGCCCGCCCCAAAGGACCACCCCTGGAGAACAATGCGAAACAAGTAC
GGTGGAGGAAACGCCATGACCCCTCATATCTCTGGTACTTCTATTGATGCCCAAGGCCGA
TACGCTGAGGGCACCAAGAAAATCCTTGAGGTCTTCTTCTCAGGAAAGCAAGACTACCGA
CCCCAGGATATCATCTGTATCAACGGTCACTACGGTACCAAGGCTTACGGTGACGACAAG
GAGCACAAGGAGCACAAGGAGCACGAGGTCAAATAAGCTATCAGCTCTATAGTACTGTAC
AGTAGGTACAATAGGATCTTGATATTACAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19976g_CDS-001

Protein length: 372 aa.
Product: Formate dehydrogenase, putative

>YALI0B19976g_CDS-001 MKVLLVLYDAGSHAKDEPKLLGCTENELGIRDWLESQGHTLVTTSSKDGADSVLDKEIVD
ADVVITTPFHPGYINKERIDKAKKLKICITAGVGSDHVDLDAANARDIAVLEVTGSNVQS
VAEHVVMTMLVLVRNFVPAHEQIISGGWDVAAVAKDSYDLEGKVIGTVGGGRIGQRVLKR
CKPFDPMEMLYYDYQPMPADVEKEIGCRRVESLEEMLSLCDVVTINCPLHASTKGLFNKK
LISHMKDGAWLVNTARGAICVTEDIVEALESGKIRGYGGDVWFPQPAPKDHPWRTMRNKY
GGGNAMTPHISGTSIDAQGRYAEGTKKILEVFFSGKQDYRPQDIICINGHYGTKAYGDDK
EHKEHKEHEVK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG