YALI0B19668g

Overview

Description similar to uniprot|Q12402 Saccharomyces cerevisiae YPR028w YIP2 protein or Ypt Interacting Protein, regulates vesicular traffic in stressed cells either to facilitate membrane turnover or to decrease unnecessary secretion
Locus type CDS
Locus tag YALI0B19668g

Location

Species Yarrowia lipolytica Positions 2597122..2598079
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 958 (nuc.)
Previous locus YALI0B19646g Next locus YALI0B19712g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19668g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19668gYALI0B19668g_mRNA-001YALI0B19668g_CDS-001

Nucleotide sequence

 

>YALI0B19668g
ATGTCTCAAATCATTGATCAGGTTCAGGCCGCTCTTCAGAACATTGACAAGGAGCTCGAG
AAGTACCCTGCTCTCAAGGAGCTGGAGAAGCAGATTCGTGAGTATTGCAATCAATGCGAT
CTTTGTGATCGGATTGGAACGTGTTAGCAGTGTTACATGTTACACAGACAGCTGCGATGA
GCAGCTGATAACCGACAGGAGTGCACAGAAACAATTCAGATAATTTCCCATTACTCCCCA
AAACTGCTGTTATGCAAAGACAGGTGCAACTGTCAATAGTGCCTGTGATTAGTTTCATGT
GATCACCACAGTGCCTCCCCAACCACAACTAACAATAGCCGTCCCCAAGTCCTACATCCT
GCTTGGCTTCGTTGGATTCTACTTCATCCTCATCTTCCTCAACATTGGAGGAATTGGTCA
GCTTCTGTCCAACATTGCTGGTCTGGTCATCCCCGGCTACTACTCTCTGCTGGCTCTGGA
GACCCCCGGCAAGGCCGATGACACTCAGTACCTGACCTACTGGGTTGTCTTCGCCACCCT
CAACGTCTTTGAGTTCTGGTCCAAGGCCATCCTTTACTGGGTGCCCTTCTACTACCTCTT
CAAGACCGCCTTCCTTCTGTACATTGGTCTCCCCCAGTACGGAGGTGCCGAGCTTGTCTA
CAAGGCCATTGTCAAGCCCCTCGCTCAGAAGCTTGTCAACATCCAGCCTCACGGCGGACC
TTCCGACTCTCTCAAGGCCCAGGCCCAGTCTGCTGTCGATGCTGCTGAGAGCCACGTCCC
CCAGGGTCACTCCACTGGTGTTTCTCACTAAGCCGAAATAGCCAAAGGATTATAGACTGG
TATGTCGTAGAGCTGAAGCATTTTAGGGCTGAGAAGCCATTGTAGCTGAGAATATGTACA
GTACATGGTCACAAGTGCAACTAAAGTACATACTGTAATGTCGATAGGTAGATAGAGC

Legend

Locus sequence
Up/downstream sequence

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Translation(s)

YALI0B19668g_CDS-001

Protein length: 190 aa.
Product: Membrane protein that interacts with Yip1p to mediate membrane traffic, putative

>YALI0B19668g_CDS-001 MSQIIDQVQAALQNIDKELEKYPALKELEKQIPVPKSYILLGFVGFYFILIFLNIGGIGQ
LLSNIAGLVIPGYYSLLALETPGKADDTQYLTYWVVFATLNVFEFWSKAILYWVPFYYLF
KTAFLLYIGLPQYGGAELVYKAIVKPLAQKLVNIQPHGGPSDSLKAQAQSAVDAAESHVP
QGHSTGVSH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG