YALI0B19624g

Overview

Description similar to uniprot|Q874C0 Yarrowia lipolytica Pex3p peroxin
Locus type CDS
Locus tag YALI0B19624g

Location

Species Yarrowia lipolytica Positions 2593579..2595288
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1710 (nuc.)
Previous locus YALI0B19602g Next locus YALI0B19646g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19624g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19624gYALI0B19624g_mRNA-001YALI0B19624g_CDS-001

Nucleotide sequence

 

>YALI0B19624g
ATGCTTCAGTCGCTCAACCGAAACAAGAAACGGCTGGCCGTGTCGACCGGCCTCATCGCC
GTGGCCTACGTGGTCATAAGCTATACCACAAAGCGGCTCATCGAGAAGCAGGAACAGAAG
CTCGAAGAGGAGCGTGCTAAGGAGAGGTGAGTACACAAACACAGAGGAGCTAGGGGCACG
ACAGACAGAAGAATGGACACAAGCGAAACAGAGATGTGGCTAATGACATGACCAGAAGTG
GTTGCCAAACGAAACGTGTTCGCAGCTTGTGTATCGGCCCCACTTACGCCATATCATTAC
TTCATGCATATATTGGTGTGTTATGTGGGGTATACCAGTACTAACACAGACTCAAACAAC
TGTTTGCACAGACACAGAATGAGGCAGCGTTCCATACGGCGTCAGTGCTTCCCCAGCTAT
GCGAACAAATCATGGAGTTTGTGGCTGTCGAGAAGATCGCCGAACAGCTCCAGAACATGC
GTGCGGAGAAGCGCAAGAAACAGAACATGGACGACGACAAGCACTCGGTGCTGTCGCTAG
GCACAGAGACGACGGCCAGCATGGCAGACGGCCAGAAAATGAGCAAGATTCAGCTGTGGG
ACGAGCTCAAGATTGAGTCGCTCACCCGAATCGTCACTCTCATTTACTGCGTGTCTCTGC
TCAACTACCTCATCCGACTGCAGACGAACATTGTGGGACGAAAGCGATACCAGAACGAGG
CTGGACCTGCGGGAGCCACATACGACATGTCACTGGAACAATGTTACACGTGGCTGCTCA
CCCGAGGATGGAAGTCGGTGGTGGATAATGTGCGACGGTCAGTTCAACAGGTTTTTACTG
GCGTCAACCCGCGGCAGAACCTGTCTCTTGACGAGTTTGCTACTCTTCTCAAGCGTGTAC
AGACTCTCGTCAACTCCCCACCCTACTCCACCACCCCTAATACGTTCCTTACATCGCTCC
TGCCACCTAGAGAACTGGAGCAGCTGAGGCTCGAAAAAGAAAAGCAAAGTCTGTCACCCA
ACTACACTTACGGCTCGCCTCTCAAGGATCTCGTATTTGAGTCAGCTCAACACATTCAGT
CGCCACAGGGAATGTCATCTTTCCGAGCCATCATTGACCAGAGCTTCAAGGTCTTTCTGG
AAAAGGTGAACGAGAGCCAGTACGTCAACCCACCGTCCACAGGCGGAAAGCGTATTGCTG
TGGGCGCGCTACAGCCTCCCATAATCTCTGGAGGCCCCAAGAAGGTGAAACTGGCGTCCC
TGCTATCTGTGGCCACACGACAGTCGTCTGTGATTTCTCATGCCCAGCCCAACCCCTACG
TTGACGCAATCAACAGCGTTGCAGAGTACAATGGGCTGTGCGCCGTGATTTACAGCAGCT
TTGAACAATAGACAAGTAATTAATTGCCCACGAAGTCTATCTCAGTTATGCTTGGACTAC
AATGGCCAGGCACGGTCATTGGTATGAGACACAGCTGTGCCACGATGGCAGAATATTACC
AGCGGGTTACTTTTGTAGGTCTCTCTTATGTACCATGTCCATCCTGCCAGGTGCATTTTA
GGTGTATTGAACGAGAGCCCATTGTCCCAACGTGTTTTTTTCGCGTACCTCACGAGGTTG
ACTGTGGATGGAGGGGCTATTGTCGAAACAAGATTGTTTTGGTGCCGTGCCATACGATAT
AGTTAGTTGCCTATCAACCAATGTTCCATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19624g_CDS-001

Protein length: 396 aa.
Product: Peroxisomal biogenesis factor 3, putative

>YALI0B19624g_CDS-001 MLQSLNRNKKRLAVSTGLIAVAYVVISYTTKRLIEKQEQKLEEERAKERLKQLFAQTQNE
AAFHTASVLPQLCEQIMEFVAVEKIAEQLQNMRAEKRKKQNMDDDKHSVLSLGTETTASM
ADGQKMSKIQLWDELKIESLTRIVTLIYCVSLLNYLIRLQTNIVGRKRYQNEAGPAGATY
DMSLEQCYTWLLTRGWKSVVDNVRRSVQQVFTGVNPRQNLSLDEFATLLKRVQTLVNSPP
YSTTPNTFLTSLLPPRELEQLRLEKEKQSLSPNYTYGSPLKDLVFESAQHIQSPQGMSSF
RAIIDQSFKVFLEKVNESQYVNPPSTGGKRIAVGALQPPIISGGPKKVKLASLLSVATRQ
SSVISHAQPNPYVDAINSVAEYNGLCAVIYSSFEQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG