YALI0B19448g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B19448g

Location

Species Yarrowia lipolytica Positions 2569869..2571304
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1436 (nuc.)
Previous locus YALI0B19404r Next locus YALI0B19470g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19448g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19448gYALI0B19448g_mRNA-001YALI0B19448g_CDS-001

Nucleotide sequence

 

>YALI0B19448g
ATGAGCTACACGATCTCAGCAGCAGCTCTATATTCTGCAACGATATACCTGTTGTTTCTG
CGCGACAGAAGTCGACAAAGTCTCGAGCGAAGTGAAATTCTGGCTGCAAGGGAGGCTACA
AACTACAGCATCAGCAATACGACTATTTTCTCCGGAGTGACAGCTAAAAGCTACGGTTTC
AATGCGCATTACAGAGGGGTTCCCGCAACGTACTGGTCGTGGCTGCTGTTGGTCCAGGGT
CTGTTTGTGCTGGGCATGTTCTACATGGACTGGCCAACAGTTGGATATGGAGCACTTCTC
GTCTGGAGCTTTTATGCTTATGCCACGGAGCAGTGTGACAAGCAGGGGCGCATGAGTGGC
CTCAAGATCCAGAGCATGTTTGGTCCGGTCAAAACGTTTGCTGGCCGGGACAAGTTCCAC
TGGTACGCTGTTGTCAACACGGGTACCTCTCTTGATCTGTTGCCAGAGTCATCTGATGAT
GAGCTTTCTGAGGAGGAGGAGGAGGACGTCGAGATGGACGGCGACGTCAACATGGAAGAA
ACTTACCGGACTCTGAGACAAAATATGCATAGTTTCGAGGAGATTATGGGGGAGGGAGAA
GAGGTTGTGTTTGAGGTGGACGAGCCGGTCGAGGAGGACTATGGAATGGACGAGTTTGAT
ATTGAGGGTGAAGACGATGAGCCCAAGTTTGAGGGGTTTTCACCTGTTCTGTCTCCCCAT
GACCCTTCTGATTCGGGTGAGCAAGAAGAGACTCGCATGCTCGACGAATGGGACAGAGAG
AGTTATGCTCCTTCGGTCGGAGGACGAGCCATGGAGGAAGAGAACTCCGACGAAGAGGAC
TACATGAGCCCTGATACACCCGGCTCGATTCAGCTTGTTTTGAAGCGCGTGAATCTTCCG
CTTCCTCCCGTCCACCACTTTCAGGGATACATTGGAGTGTATAGACATACCAGGCTCAAG
AGATCGACCGTGGTGCACACGTGCCTTGATCCCATGGACTATGAAGCCATGGAAACGGTT
GTTCTCTAGAGACACAGTGCATCACGAGTGGAATTGTGACAGGATAGGCAAGAAAATACG
CCAGAGGGGACATGGTGAACCAAAAGTGACTTTATTTGCGCAGAATATGGCGGCATGGTA
CAAGTATCATGGTTTGTGGGTGAAGTTGGGGTTTGTGGGTCCAGGGCAGTTGGTTCAACT
GGGTCCACTTGTGAATGCGGGGTTGTTGAGCAACCCTCTTGCCTTTTCTTGGCCACCCCA
TACTGCTTCTGAACTGGTCTGATGGGGATCTGACGCGGTGTCTGAGTTTGGTGTCTTACT
GCTTGTAGGAGAATCCTCAGACGAGTACATGCGGTAGGGTTTCTACACGCTCAATTGCGT
GCTGGGGCGTTATTTATGCACTAGTACACGGGTATTTAAATACAGGTTGGATGTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19448g_CDS-001

Protein length: 343 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B19448g_CDS-001 MSYTISAAALYSATIYLLFLRDRSRQSLERSEILAAREATNYSISNTTIFSGVTAKSYGF
NAHYRGVPATYWSWLLLVQGLFVLGMFYMDWPTVGYGALLVWSFYAYATEQCDKQGRMSG
LKIQSMFGPVKTFAGRDKFHWYAVVNTGTSLDLLPESSDDELSEEEEEDVEMDGDVNMEE
TYRTLRQNMHSFEEIMGEGEEVVFEVDEPVEEDYGMDEFDIEGEDDEPKFEGFSPVLSPH
DPSDSGEQEETRMLDEWDRESYAPSVGGRAMEEENSDEEDYMSPDTPGSIQLVLKRVNLP
LPPVHHFQGYIGVYRHTRLKRSTVVHTCLDPMDYEAMETVVL*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG