YALI0B19338g

Overview

Description similar to uniprot|P04817 Saccharomyces cerevisiae YEL063C (ohnolog of YNL270C) CAN1 amino acid permease
Locus type CDS
Locus tag YALI0B19338g

Location

Species Yarrowia lipolytica Positions 2557513..2559332
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1820 (nuc.)
Previous locus YALI0B19327r Next locus YALI0B19349r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19338g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19338gYALI0B19338g_mRNA-001YALI0B19338g_CDS-001

Nucleotide sequence

 

>YALI0B19338g
ATGGAAAAGACATTTTCAAACGATTACCCACCCTCCGGGACTGAGGCCCACATCCACATC
AACCACACGGCCCACTCGGATGACTCAGAGGAGGTGCCCTCGCACAAGGAAAATTACAAC
ACCAGTGGCCACGACCTGGAGGAGTCCGACCCGGATAACCATGTCGGTGAGACCCTCGAG
GTCAAGCGAGGTCTCAAGATGCGACACATCTCCATGATCTCGCTTGGAGGAACCATTGGT
ACCGGTCTCTTCATTGGTACCGGAGGAGCTCTCCAGCAGGCCGGTCCCTGTGGCGCCCTC
GTCGCCTACGTGTTCATGGCCACCATTGTCTACTCTGTTGCCGAGTCTCTTGGAGAACTG
GCTACGTACATTCCCATCACCGGCTCCTTTGCCGTCTTTACTACCCGATATCTGTCACAG
TCGTTTGGTGCCTCCATGGGCTGGCTATACTGGTTCTCGTGGGCGATCACCTTCGCCATC
GAGCTCAACACCATTGGTCCCGTGATTGAGTACTGGACTGACGCCGTTCCTACTGCTGCC
TGGATTGCCATCTTCTTCGTCATCCTCACTACCATCAACTTCTTCCCCGTGGGCTTCTAT
GGCGAAGTCGAGTTCTGGGTGGCCTCCGTGAAGGTCATTGCCATCATTGGATGGCTCATC
TACGCGCTCTGCATGACGTGTGGAGCAGGTGTAACAGGTCCTGTGGGATTCAGATACTGG
AACCACCCCGGACCCATGGGAGACGGAATCTGGACCGACGGCGTGCCCATTGTGCGAAAC
GCGCCCGGTCGACGATTCATGGGATGGCTCAATTCGCTCGTTAACGCCGCCTTCACCTAC
CAGGGCTGTGAGCTGGTCGGAGTCACTGCCGGTGAGGCCCAGAACCCCAGAAAGTCCGTC
CCTCGAGCCATCAACCGAGTCTTTGCTCGAATTTGCATCTTCTACATTGGCTCTATCTTC
TTCATGGGCATGCTCGTGCCCTTTAACGACCCCAAGCTGACCGATGACTCCTCCGTCATC
GCCTCCTCTCCTTTTGTTATTGCCATTATCAACTCTGGCACCAAGGTGCTCCCTCACATT
TTCAACGCCGTCATTCTCATCACCCTGATTTCGGCAGGAAACTCCAACGTCTACATTGGC
TCGCGAGTGGTCTACGCCCTGGCTGACTCCGGAACCGCACCAAAGTTCTTCAAGCGAACC
ACCAAGAAGGGAGTGCCGTACGTGGCAGTCTGCTTCACCTCGGCGTTTGGTCTGCTGGCC
TTCATGTCTGTGTCCGAGTCGTCGTCCACTGTCTTCGACTGGTTCATCAACATCTCCGCT
GTGGCCGGCCTCATCTGTTGGGCCTTCATCTCTGCCTCCCACATCCGATTCATGCAAGTG
CTTAAGCACAGAGGGATCTCCAGAGATACGCTGCCCTTCAAGGCACGATGGCAGCCATTC
TACTCATGGTACGCGCTCGTCTCCATCATCTTCATCACTCTCATCCAGGGCTTCACGTCC
TTCTGGCACTTTACCGCCGCCAAGTTCATGACTGCATACATCTCCGTCATTGTCTGGGTC
GGTTTGTACATTATCTTCCAGTGTCTGTTCCGATGCAAGTTCCTTATCCCTATTGAGGAT
GTGGACATTGACACCGGCCGACGAGAGATTGACGACGATGTGTGGGAGGAGAAGATCCCC
ACAAAGTGGTACGAGAAGTTTTGGAATATTATTGCATAAGAAGATCGGGGATTCCCGACG
CTCTCTCCTGGAGCAAACCACTCTTACCAAGCATATAGCATATATAATAACGTATTGAAT
TTATTAACTGATTGAATTGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19338g_CDS-001

Protein length: 573 aa.
Product: Plasma membrane arginine permease, putative

>YALI0B19338g_CDS-001 MEKTFSNDYPPSGTEAHIHINHTAHSDDSEEVPSHKENYNTSGHDLEESDPDNHVGETLE
VKRGLKMRHISMISLGGTIGTGLFIGTGGALQQAGPCGALVAYVFMATIVYSVAESLGEL
ATYIPITGSFAVFTTRYLSQSFGASMGWLYWFSWAITFAIELNTIGPVIEYWTDAVPTAA
WIAIFFVILTTINFFPVGFYGEVEFWVASVKVIAIIGWLIYALCMTCGAGVTGPVGFRYW
NHPGPMGDGIWTDGVPIVRNAPGRRFMGWLNSLVNAAFTYQGCELVGVTAGEAQNPRKSV
PRAINRVFARICIFYIGSIFFMGMLVPFNDPKLTDDSSVIASSPFVIAIINSGTKVLPHI
FNAVILITLISAGNSNVYIGSRVVYALADSGTAPKFFKRTTKKGVPYVAVCFTSAFGLLA
FMSVSESSSTVFDWFINISAVAGLICWAFISASHIRFMQVLKHRGISRDTLPFKARWQPF
YSWYALVSIIFITLIQGFTSFWHFTAAKFMTAYISVIVWVGLYIIFQCLFRCKFLIPIED
VDIDTGRREIDDDVWEEKIPTKWYEKFWNIIA*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG