YALI0B19250g

Overview

Description weakly similar to uniprot|P38731 Saccharomyces cerevisiae YHL040c ARN1 ferrichrome-type siderophore transporter
Locus type CDS
Locus tag YALI0B19250g

Location

Species Yarrowia lipolytica Positions 2545384..2547339
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1956 (nuc.)
Previous locus YALI0B19228g Next locus YALI0B19272r

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19250g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19250gYALI0B19250g_mRNA-001YALI0B19250g_CDS-001

Nucleotide sequence

 

>YALI0B19250g
ATGCCTGAGTGGAAAGCCATCTGGAAAACCATCTTCAACCCGGAGGTGACCATCGCCCAG
GACGCTCCTGATCTCGACGGTCCCGGAGGAGTCAAGGAGATTGAGAACGTGACCTCCATC
TGGTCCAAGAAGGGTCTGTGGATCGCCTGGGGCTCCATGCTGCTGCTGGCCGTTGCCATT
GCTCTGGACGCCCAGACTGTCTTCGTCTACTCCACCTTCGCCACCTCCTCCTTCAACCAA
ATGTCACTGCTGTCTGCTCTCGGAGTTGTGCAGTCCGTGATGTACATTGCTACTCGACCT
GTCATGGCCAAGATTGCTGATGTCCTGGGTCGATTCGAGGGTCTGCTGCTCTCCATTGTC
ATCCTGACTGTTGGATTCATCATGCTGGCAGCTTCGCCCAACATTGGTACCTACTTTGCT
GCCCAGATCTTCTACGTTTTTGGCCAGGTCGGAATCCAGTTCATGCAGCAGGTGTTTGCT
GCTGATACCTCCGACCTGAAGAACCGTACCTTCTTCGTCATTCTACCTAACCTGTGCTAC
CTGTTTGTGCCCTGGTGCGCTGCCCCCATCACCAACGCCGTGCTCAAGCACACCACCTGG
CAGTGGGGATACGGAATGTGGTGCATCATCGTACCCGTGGTCTCCATCCCTGTGCTCACC
ACAATGTTCGTCAACAAGCTCAAGGCCCGACGATTGGGTCTGCAGGCCGGTCTGGCAGTC
AAGAACTTCAAGAAGACCGTCCAGCACTTTGACTTCATCGGTCTGATTCTGCTGACTGCA
GGCCTCGTCACTCTGTTCCTGGCTGCTACTCTCGTCAAGACCTCTGCCGACTGGAACAAG
CCCCACGTTCTGGGCATGATCATCGTCGGACCCATCTGTCTGACCCTCTTCCCCATCTGG
GAAATCTTCCCCAAATACCCGTTCCTGCCCTTCCGAGTGCTCCGCAACCGAGTTCTGCTC
ACTTGCTGCTTCTACATCGCCCTCTACTTCCTGGCCTTTTATCTTTACCAGCCTTACTAC
TATTCCTGGCTGATGGTATGCAAGAACCTGAGTGTTACTGCTGCTACCAACACCTCCGTG
ACTACCACCGTCTCTTCTACTGCCGGAGGTCTGTTCACTGCTATTGCTATCCGATACACC
AAGCGAATCAAGCCCTTCATTGTCGTTGGATCATGCATCTACCTGCTTGGTCTGGGTCTC
TCCTACAACTACCGACAGCCCTACCACTCCCTGGCACAGTTCATTGTCTCACAGGCTGTG
GAAGGTGTCGGAGCTGGTATGCTGGGATCCCCTACCCAGGTCATGGTCCAGGCTGTTGTC
TCTCATAACCAGGTCGCAGCTGCTACTGCCGTCTACCTGTCTTCTACCTCCATTGGTAAC
GTTGTTGGAGACGCCATCTCTGGTGCCATGTACCGACAGATGTACCCCAAGCGACTGCGG
GAGTACGCCTCTTTCCTCAACGAAACCGAGATTGACACCATCATCAACAACATCAACGAG
CCCCTCAAGTACACCTGGGGTTCTCCTGAGCGAACCCAGATTGTCACCGCCTTCAACAAG
GTCTACCGACACATGCTTTATGGTCCTTTGATTGTTGCTGGTGCCATGATTGTCATTTCC
CTGACTCTTCCTAATATCAACCTCGACGAGATTGAGCAGCAGGTCAAGGGAGTGGTCTTC
GGCAAGTCCCAGAAGGCCAACCAGGCCGACGAGAACCCTGTTGGCGACTTTGGAGGAAAC
CCTGTTGGTGGCTTCGGAGCCGAGCCCGTCGCCGCCTTCGCTCCCGAGTACAACGGACAG
CATGATATTGAGAAGAACGCGTACGAGCAGAAACTCGAGTTGGACACTGAGTCCGACAAG
AAGTCCGAGACCCGTGTCTAAGGACACCACAAAAAATTACTAATGAGACATGAGACAAAA
ATATAGATTTATAATAATAATATTGCATTTTAGGAC

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19250g_CDS-001

Protein length: 627 aa.
Product: Conserved hypothetical protein

>YALI0B19250g_CDS-001 MPEWKAIWKTIFNPEVTIAQDAPDLDGPGGVKEIENVTSIWSKKGLWIAWGSMLLLAVAI
ALDAQTVFVYSTFATSSFNQMSLLSALGVVQSVMYIATRPVMAKIADVLGRFEGLLLSIV
ILTVGFIMLAASPNIGTYFAAQIFYVFGQVGIQFMQQVFAADTSDLKNRTFFVILPNLCY
LFVPWCAAPITNAVLKHTTWQWGYGMWCIIVPVVSIPVLTTMFVNKLKARRLGLQAGLAV
KNFKKTVQHFDFIGLILLTAGLVTLFLAATLVKTSADWNKPHVLGMIIVGPICLTLFPIW
EIFPKYPFLPFRVLRNRVLLTCCFYIALYFLAFYLYQPYYYSWLMVCKNLSVTAATNTSV
TTTVSSTAGGLFTAIAIRYTKRIKPFIVVGSCIYLLGLGLSYNYRQPYHSLAQFIVSQAV
EGVGAGMLGSPTQVMVQAVVSHNQVAAATAVYLSSTSIGNVVGDAISGAMYRQMYPKRLR
EYASFLNETEIDTIINNINEPLKYTWGSPERTQIVTAFNKVYRHMLYGPLIVAGAMIVIS
LTLPNINLDEIEQQVKGVVFGKSQKANQADENPVGDFGGNPVGGFGAEPVAAFAPEYNGQ
HDIEKNAYEQKLELDTESDKKSETRV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG