YALI0B19008g

Overview

Description similar to uniprot|Q9C101 Schizosaccharomyces pombe Putative membrane transporter
Locus type CDS
Locus tag YALI0B19008g

Location

Species Yarrowia lipolytica Positions 2511601..2513196
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1596 (nuc.)
Previous locus YALI0B18986g Next locus YALI0B19030g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B19008g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B19008gYALI0B19008g_mRNA-001YALI0B19008g_CDS-001

Nucleotide sequence

 

>YALI0B19008g
ATGGCGGAAAAAAACGACTTTCTGGTGGAAGCCGGGCTCAACGGCTCCTCCGACGTCAAA
CATGAGGACTCCCACTCTCTGTCTTCCACAGATGTGGACAGCACGTCCATGGACATGATT
GCCGACGACAAGGTGCTGTACGAACAGATGCGGATCATCAACAACACAATTGACGAGATT
GGGCTGACGGCTTACCATTGGAAGCTCTTCTGTCTGAACGGAATGGGTTATGCCACCGAC
TCGACTCTCACCTTTATCCAGTCTCTCACTCTGGCTCCTACCCAGAAGGAATTCGACTTT
GAGTTCCCCGGTCCTACCATGGCTCTGTACGGTGGTATGCTTCTTGGTGCCATTATCTGG
GGCTTTTCGGCCGACATTATCGGTCGAAAGTTCGCCTTCAACTCTTCGTTGATCTTATCG
GCCGTTTTTGCCATGATTGCCGCAGGTATGCCCAACCTGGCAGGGTACTGTGTTCTGGTG
GCCATGAGTGCTGCTGCTGCTGGAGGAAATTTGGTTCTCGACACCACAGTATTTCTGGAG
TTTCTGCCCAGCTCTCAACAGTGGCTCCTCACCCTGTTGGCTGCCTGGTGGGGTGTGGGT
CAGCTAATTGCGGTGCTTGTGATCTGGCCGTTCATGGCCAACTACCAGTGCGAGAGCAAG
GACTACTGCCCCAAGCACATCAACATGGGCTGGCGGTACTCTTGGATCACCCTCGGAGGC
ATGGTTCTCATTCTGGGAATTCTGCGTATCACCGTCATTCGACTTATTGAGACCCCCAAG
TTCAATCTGTGCGAAGGAAACGTCGAGCAGGTGGTCAAGGATCTGCACAAGATTGCCAAC
GCCGGAGGAAAGACCATTTCCCTGACCGTCGAGCAACTGGAGGCCTGTGGAAAGCTAGAT
CCCGCCCAGCTGAGAAAAAACCAGAAATGGAAGTGGGTCAAGGACCTGGGAACCAACGTC
AAGCTGCTGTTTGCCAACCGAAAGCTCGCCCAGAGCACCACTATCTTGTGGATCTCCTGG
ACGGTTCTTGGTATCGCCTACCCTCTATACTCCTCCTTCTTGCCTGCCTACCTCTCGTCT
CGAGGAGCCCAAACAGGAGGAGGAACCATCGATGATACTTACCGAGCCATGTCCATCTCC
AACACCTTCTCCATTTTCGGGCCCGTGTTGGCTGCCATTCTTCTCTTTGTCCCCAAAATT
CCTCTATGGGGTCGATTCTACATTCCTGCTCCCGGAAGAAGAGGAGCCATGTGTATCGGA
GCCCTGCTGACTATGACCTTCTTTTTCGCCTACACCACCGTCAAAACCGAGGTCCAGAAT
GTGGCCTTCTCCTCAGTCACCTCCCTCACCATCTACACCTACTACGGAACGCTCTACGCC
TTTACCCCGGAGGTCATGCCCTCAAGAGCTAGAGCCACAGGAAACGGAATCGCCATTGCC
TTCACCCGACTGGCTGGTATCATGTCTCCTCTCATTGCGTACTATGGAGACACGAGCTCC
AGTATTCCCATTTACGTGTGTGCCGCGTGCTACGGCGCCCTGGGTCTGGGATGCTTCCTG
TATCCTTTTGAGCCCATGGTCAACCGGGCTATGTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B19008g_CDS-001

Protein length: 532 aa.
Product: Membrane transporter, putative

>YALI0B19008g_CDS-001 MAEKNDFLVEAGLNGSSDVKHEDSHSLSSTDVDSTSMDMIADDKVLYEQMRIINNTIDEI
GLTAYHWKLFCLNGMGYATDSTLTFIQSLTLAPTQKEFDFEFPGPTMALYGGMLLGAIIW
GFSADIIGRKFAFNSSLILSAVFAMIAAGMPNLAGYCVLVAMSAAAAGGNLVLDTTVFLE
FLPSSQQWLLTLLAAWWGVGQLIAVLVIWPFMANYQCESKDYCPKHINMGWRYSWITLGG
MVLILGILRITVIRLIETPKFNLCEGNVEQVVKDLHKIANAGGKTISLTVEQLEACGKLD
PAQLRKNQKWKWVKDLGTNVKLLFANRKLAQSTTILWISWTVLGIAYPLYSSFLPAYLSS
RGAQTGGGTIDDTYRAMSISNTFSIFGPVLAAILLFVPKIPLWGRFYIPAPGRRGAMCIG
ALLTMTFFFAYTTVKTEVQNVAFSSVTSLTIYTYYGTLYAFTPEVMPSRARATGNGIAIA
FTRLAGIMSPLIAYYGDTSSSIPIYVCAACYGALGLGCFLYPFEPMVNRAM*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG