YALI0B18854g

Overview

Description weakly similar to uniprot|Q03649 Saccharomyces cerevisiae YMR210w
Locus type CDS
Locus tag YALI0B18854g

Location

Species Yarrowia lipolytica Positions 2476369..2477888
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1520 (nuc.)
Previous locus YALI0B18832r Next locus YALI0B18876g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18854g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18854gYALI0B18854g_mRNA-001YALI0B18854g_CDS-001

Nucleotide sequence

 

>YALI0B18854g
ATGAACCCCACTATCGAACGATCCGCACGGCTGGCCGACTACGTCTGGTCGTTTCTGGGC
GCACACAAGGTGGTGGTTGGCCTGTTTCTGGCCGCCTACTTCATTTTCAAGTCACGAGAC
CATGTGAAGATCACCAAGCCCAGAAAACCGTTGGAGCTGCATCTCAAGAACGGCAAGACT
GAGTCGCTCGACGCTCTGATCCAGCAGGTCCCCGGCCTCAAAAACGGCGACACTCTGTGG
TACAACCCTCTCAAGATCCTCAACCATGTGCAGACCATCATGGCTTCTCAGAACGACCTC
CATGGCACCGACCTGGTCTACTACGCCCGACGAATGGTTGATTTCGACGACGGCGTTCAG
ATTGCCGCCGATTACGTCGTCCCCGCCCCCAAGACCCCTGAGGAAAAGGCGGCCTGGAAG
AAGGGACTCGAGTACAAGCCCGAGGAGAACACCCCGAAGTTCCCAGTTCGAACCCGATAC
AAGCAGCCCCAGGAAGTGGAGCTCGACCACAGCGACGACTCCAAGCCCATGCTGATTCTT
CTCCACGGCCTCACCGGCGGCTCTTATGAGTCCTACGTGCGAGCTGTTGTTGCTAAAATC
ACCTCTCAATACAACGCTTCTGCCGACGGAACCCTTGTAGACTTTGAGTGTGTTGTCATG
AACACTCGAGGATGCGCCCGAACCACCATCAAGACCCCCGAGCTGTTCAACGGCTGCTGG
ACCGAGGACGTGCGAAGGTTTGTCAAGGATATGCGAAAGCGATACCCCAACCGGCGATTC
TACATGGTGGGTTTCTCTCTTGGAGCCTCCATTCTCGCTAACTACCTGGGCCAAGAGGCC
GAGGACATCGACATTGAGGCTGCCTGTGTTGTTGCCAACCCCTGGGACCTGTGTGCCTCA
TACTACGCCCTGCGAAGCTCGTGGTCTGGACGACACCTGTACAACCCCCAGATGGCTAAG
AACCTGCTGCGAATGCTCCGAAACCACCGGGAGGTCATGAAGCGAAACCCCATCTACGAC
GAGTCGCTGACTAAGCAGGTCAAGTCCATTGTCGACTTTGACAACCTGTTCACCGCCCCC
ATGTTCGGATTCGACACCGCCACCGACTACTATCGACATGGCTCGTCGTGTAACCGAATC
ATGAACATCCGAGTCCCCACTTTGATTCTGCATGCCCTGGACGACCCCGTGGCTCCCGGC
TTCCAGCTGCCCTACCACGAGATCAAGCGAAACCCCTACACCGTCATGGCTGCCACCAAT
CATGGAGGACACATTGGCTGGTTCCACTGGGGCAAGGACAAACGATGGTTCCCCTCCAAG
ATTGCTGGTTTCTTCTCGCAGTTTGAGAAGGAGGTGGATCACACCAAGGACAACAACACA
AAGGTGGAGCGACTGGAGCGTCGGTGGGAGAATGATAGACTTCGAGCTGTTCGATACGAT
TAGCCCATGAACGATGCAAACCCATGAACGAACTTCACCAGTAATTAGAAATATAGATTA
ACAAAAGTATTAGATAACAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18854g_CDS-001

Protein length: 481 aa.
Product: Conserved hypothetical protein

>YALI0B18854g_CDS-001 MNPTIERSARLADYVWSFLGAHKVVVGLFLAAYFIFKSRDHVKITKPRKPLELHLKNGKT
ESLDALIQQVPGLKNGDTLWYNPLKILNHVQTIMASQNDLHGTDLVYYARRMVDFDDGVQ
IAADYVVPAPKTPEEKAAWKKGLEYKPEENTPKFPVRTRYKQPQEVELDHSDDSKPMLIL
LHGLTGGSYESYVRAVVAKITSQYNASADGTLVDFECVVMNTRGCARTTIKTPELFNGCW
TEDVRRFVKDMRKRYPNRRFYMVGFSLGASILANYLGQEAEDIDIEAACVVANPWDLCAS
YYALRSSWSGRHLYNPQMAKNLLRMLRNHREVMKRNPIYDESLTKQVKSIVDFDNLFTAP
MFGFDTATDYYRHGSSCNRIMNIRVPTLILHALDDPVAPGFQLPYHEIKRNPYTVMAATN
HGGHIGWFHWGKDKRWFPSKIAGFFSQFEKEVDHTKDNNTKVERLERRWENDRLRAVRYD
*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG