YALI0B18524g

Overview

Description some similarities with uniprot|P53137 Saccharomyces cerevisiae YGL110C CUE3 Protein of unknown function
Locus type CDS
Locus tag YALI0B18524g

Location

Species Yarrowia lipolytica Positions 2423902..2425804
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1903 (nuc.)
Previous locus YALI0B18502g Next locus YALI0B18546g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18524g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18524gYALI0B18524g_mRNA-001YALI0B18524g_CDS-001

Nucleotide sequence

 

>YALI0B18524g
ATGGTTCTGGAAATTGACAACAGCTACCATGCGGCGCACATTCCCACTTACCCGTCCCCT
GAGGAGAAGCCTCTGATTCCAGATCAACTGTGGAACCTCTTAATCCAGGGCTGGATCCGA
GTAGCGGAGCAACACCTGATCCGGGTCTCAGACGATAACCAGCGGGTGGAGAACGCCGAC
ATTCTGGAGATCTCGACCTGGATCGACTCATATTTGAAGAATACGGAGGAAGATCAAGAC
GCAGACCCCAAACTCAACTATCTGGTGTATCAGCTGTGCTTGACATGTCCATTTGGAGTT
GTTCTGAAACCTCAGAGCGCCTGGCGGTTTGTGCTACGATACTACGCCAAGAACAGTCGG
CCAGTTCTGAATCTGCTTGGAGGAAACCCCGATCTGGCCGAGATCGCAGCTATGGGTCTA
TTGGAGCACGCTAGAGCATTCCCTCAGCAATACACACAGTACTATGACTCTGACGGAGTC
AGCAATCTGGTAGTGCTTCGATCTCTACTTGACACCGGCAACAAGGACAAGTTGGAGCCT
CTCAGTCAACTGTTTGTGGGACAAAAGTGGCTGGTTAACACTTTAGCAGCATTCCCTACG
GAAACCAACTACTCTCAATTGACACAAAAACAGAAGGATCTGGCCAGGGCATTGCTGTAT
ATTGTTTCTACATGTCTGCTTTCGATTCCCTATATTTCATATTTCGAGAAACTGATGCGA
TCTGCTCTGTTTCTGGATCTCAAGAAGAAGTACCATCTGGCCGCAGTCCTCCTATGTGCC
ACCAACTTTGTGGATTTGATCCAGGTCAAGTTTTCAAAAGCCGCTGGTTTTCAAGGTGTG
ATCTCCGTGCTCAACATTGAGAGAGATCGACTGAGTGAAAAGCCTCAGCTGAGATTCCCC
GTCACCAAGACAAAGAATGACTACAACGACTTCTCTGTCGTTGAAGATGCAGTCGCTTCG
TCGTCAGCAGCAGAGCCATCCGACGCGGATGCCCATACCATCATGGATATGTTCCCTCAG
TTTAACTTGGGCCAGGCTAAGACTCTTATTCAGCATCATGTCACCACAGAGGGAGCCATG
GAGTATATTCTCAGCAACCCCGATGTAATGGAAAACCCCAGTTCGATTCCTGAATGGAGC
AGTCGTGCCACAGAGGGTGCCCCTGCGGTTGAAATCTCAATGGACGAGTATGCACCCATG
CCAGTTCATGCCGCCAAGTCTACTCCCAAGTATATCTTTGGAAAGAAGGAGATCTCCACG
TCTCTCAACCCCGACGAAGATGCTAAATCTGCCAATCTTCAGCATGCTTTGCGTATGATC
TACGAGAGTGATGAAGATGAGAGAGACGACACTTACGAGGGCATGGAGGGAGGCACCGAG
GAGGACTCTCAGGCGAACGCCAAGCTCGACAAGATTCAGCAGTACCTGTTCCAGCTGTAC
TCTTCCAACAAGCAGGTGTTTGATAAGCTTGATCGTAAGAGCAAGGCTCGAGCTGAGCTC
AAGAAGACGACTGAGTGGTCCGACGAGCAGATCGAGGGCTGGGCAAGGATGCTGGAGCGA
AACCCCCGACAGTTCAAGATGCTCGAGAGCAAGCAGCTGGAGATGGGCGTGTCTAAGAAC
GATCAGCCCGTGGCAGAGGAAAAGAAGGACAAGGAGAAGGGCAAGGGAAAGGGCAAGGAG
ATGGAGAGAGAAATGACCCCCGAACAGGCTGCTGCTAGACAGAAACAGAAGCAGGCCCGA
GATAGACGGCACAAGACGCAGAACAAGAGCTCGACACATCATAGAAAGAGCGGACATGAC
CGGAAGATGGGTAAGGCAAACTTTGAGTAAATAAAACCACCGAAACCAGCTTTTTTGAGA
GATTTGGCCTACTGTATGTAATCATAACTATTTAATCTAGACT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18524g_CDS-001

Protein length: 610 aa.
Product: Conserved hypothetical protein

>YALI0B18524g_CDS-001 MVLEIDNSYHAAHIPTYPSPEEKPLIPDQLWNLLIQGWIRVAEQHLIRVSDDNQRVENAD
ILEISTWIDSYLKNTEEDQDADPKLNYLVYQLCLTCPFGVVLKPQSAWRFVLRYYAKNSR
PVLNLLGGNPDLAEIAAMGLLEHARAFPQQYTQYYDSDGVSNLVVLRSLLDTGNKDKLEP
LSQLFVGQKWLVNTLAAFPTETNYSQLTQKQKDLARALLYIVSTCLLSIPYISYFEKLMR
SALFLDLKKKYHLAAVLLCATNFVDLIQVKFSKAAGFQGVISVLNIERDRLSEKPQLRFP
VTKTKNDYNDFSVVEDAVASSSAAEPSDADAHTIMDMFPQFNLGQAKTLIQHHVTTEGAM
EYILSNPDVMENPSSIPEWSSRATEGAPAVEISMDEYAPMPVHAAKSTPKYIFGKKEIST
SLNPDEDAKSANLQHALRMIYESDEDERDDTYEGMEGGTEEDSQANAKLDKIQQYLFQLY
SSNKQVFDKLDRKSKARAELKKTTEWSDEQIEGWARMLERNPRQFKMLESKQLEMGVSKN
DQPVAEEKKDKEKGKGKGKEMEREMTPEQAAARQKQKQARDRRHKTQNKSSTHHRKSGHD
RKMGKANFE*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG