YALI0B18480g

Overview

Description weakly similar to uniprot|P53067 Saccharomyces cerevisiae YGL241w KAP114 Member of the karyopherin-beta family, nuclear import
Locus type CDS
Locus tag YALI0B18480g

Location

Species Yarrowia lipolytica Positions 2419598..2422503
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 2906 (nuc.)
Previous locus YALI0B18458g Next locus YALI0B18502g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18480g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18480gYALI0B18480g_mRNA-001YALI0B18480g_CDS-001

Nucleotide sequence

 

>YALI0B18480g
ATGACGTCCATCAAACAGCTTCTATTGGACATCCAGGCACCGGATAACGCGCGGATCAAG
GCCGCCGAGGCCCAACTCGACTCATTGACCTCACCTGAACACGCCGCCAACTTTGCTCTA
GCTCTCATCTCTGAATCAGACGACGGGTCCAACCCCTCGGGAACACGACAACTGGCCCTG
CAGCTGCTACGACGAGTCATCTTGAAGACCTGGTCGATTGCGTACGAGGAGTTTGGAGGC
TACCCGCTTCCCGAAGATGTCAAGAGCCGGGTGAAAACTGCACTCATTGGCCCTCTGTTG
GCCGACCACGACACCCAGAACCTGGCGGCCCAGTGCCTGGCCAAAATCGCCTTCTGCGAG
TTCCCAGACGAATGGCCCACTCTTATTGACCAGGTGGTCCAATTGATCGAGTCCGGAACC
GCACCCATGGGCGGACTGCAACTACTGAAAGAACTATTTGCAGACACACTGTCGGAGATC
CAGTTTTTCGGCATTGCTAACCAGATTATGACCATGCTACACAAGGTGGTCGCTTCGTAC
CCTCGAAACGACGTCAAGTGCGAAGCTGTCGCTGTTCTGCGAGTGTCTACGAACTTCTTC
GCCATGACAGACACTAACAACGAAACTGTGTACCACGCCATTCAGGGCTGGTGCCAGCTC
TTCGTGCCTATCTTGCAGCAAGATATCAACAAAGACGCGTACTCTCTCAACAAAGAAATC
GTGCTGGCTCTGCAGGACTTCCGGAACTTTGCCCCGAAGCCTTTCGCCGAATGCATCTTG
CCAGTATTCCAGGCATGCTTGGAAACCCTTCAAAAGGCAGCCAACGTCTACAGACAGACT
CTGGAGAATCCGGACGACGAGCTGGTCGCATTTCTGGCCCAATTGCTGCTGTTTATTGAC
ATTGCATCTTCCCAAACTGCTGTGGCCACCAACATCAAGTCGTCGTACATGGAGGAATGG
ACACACGCCATTCACAAGTGTGCTACTCTGTCAGGCCCCAAGATCGAGTCCTGGGAGGAC
TTTAACGTGTTTGTGACGGAAGAATCGGACCTGTTTCTCGGTACCTCGCTCAGATACAAC
GCTCTGCAGGTGATTGAGACCTGGTGTGAGTACATCAACATTAACTGGAACGTGCCCCAT
AATAACTGGCTGGACGTGGAGTCCTGGTTGTATCTCTGTAACGGAAAGGCAGGCCTTCCT
GACCTCGTTGCTCAAAGTGCTACTTCTAATGAACCTATTCTGAGAGCTAGAGCTTACCTG
TGTGATCCTTACACTTGCCAACCTGATGATCCAAGCGATCTGGCCGCCTGTGCATCTCTA
TTGGCGCTCATCAAGGACTCTACTCCTGATGTGAGTGCCCCTACTATTGTCCAAACAGTG
GCTAGACTTGCTCCTGACGCTGATGACGATACTCCAGCAGTTCTTTGTGAAGCTCTGGTA
GTGGCAGTCAGAAAGCAGCCCAATGTGCCCAATGTGATCCCCCTGCTGTTCGATATCGTT
GAAGACGACGTGGGTAACGTGCAGACTGGAGAACAGGTGACTTCGGCCATTGACCACATG
TCCCGTGACGTTTCTGAACAGGACTACCTCTCTATCGCCGAACAATGTGCCCCCTATATC
ACAAAGTTCCTCAACCAGGCGGAGGGAGGCTATACTTCTGCATCTGAGACTGCCATGGAC
GTTCTGACCAATCTTATGAACAACTCCCCTACCGAGGTTCTTCCCCATGGGTTTGTGAAC
CTCTTTTTCCCTGCTCTGATTCCCTTTTTGCGTTCTGGCGACGCTGATGTGCTTCAATCA
ACTACCACAGTTCTTCAGGTTCTGGTTGAGCGAGCTTCGGCTGAAATCGCTGCGTACAAG
GTCGGTAACGAGTCAGGAGGACAAGTTGTTGTGCAGTATATTGCACACTTGCTCAACCCT
GCCCTGGGAGATAATGCTCCTATTTTCATTGGCAAGCTCATCACGACTGTTATCGACAAA
TACCACAATGAGCTGGGTGCTATCAGCACAGAGATTCTGGATGCTACTGCCAGACGACTG
GGAACTGCCGACAAGCCTCTGCAAGTCACAAACTTGATTCTCGTCTTCTGTCATTTCATC
GAAGAGTCGCCCGAGAGTGTGGTGAATCTGCTTGCCGATATGAAGCTTGAGACTCCCAAG
GGTGTCCAGACCGGTCTGGAGGCTCTGTTGAAGAACTGGTTTGAGAAGTTCATTTACTCG
TCAACTTCTTCTCTCCCTTCTGTGACTGCTCTTGGTTCTCTGTTCAAGCTGCAAGACCCC
CGAATCATGGAGATGATTGTTGATGGCCGTCCTCTTCCTGTGGAGGCCGGCGTGGTTGTC
ACTCGGTCCATGGCCAAGCGAATGCAGACCTACGAGCAGATTTCGGCACAGCAGAAGATC
ATAGAGATGCTGATTGAGGATCTCAAATCGTGCGAAAACGACATTAATCGACAGGAGCAG
GAGTCAAACGCAGGCGGGCATGCGGTGCCAGTGGAAGAGGTGGACGAGGGAGACGACGAG
TGGGAGGAACTCGATGGACTGGATGAGTTAGTTCACTGGGCTCAGAATGATGCCAAGGCG
GATTTGGTTGATAACAAGGAGACCATGAGTGTCCTGAAACAGTTTTTCCAGACCGTAGCC
GCTAACAATGTGGGAGGGTTCTATGAGATTTGGCAGAGATTGACACCCCAAGAGCAGGCT
GTGGTGGAGAACATTGCCAGATAACGAACGCGCATGCAAGAAATTGCTGTGAACGTGTGA
GTCTCAGAATGAGCAGCGTTTGCTAGACGGGGTTCATGGTACATAGATGAACGCACTGCA
GGGTACAGAGCTTGTGCCCAGTCACTCGATCACTGGAGCGCATATATTAATATACAGGCT
AGAAAAAATACATTCTAGATACAACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18480g_CDS-001

Protein length: 908 aa.
Product: Conserved hypothetical protein

>YALI0B18480g_CDS-001 MTSIKQLLLDIQAPDNARIKAAEAQLDSLTSPEHAANFALALISESDDGSNPSGTRQLAL
QLLRRVILKTWSIAYEEFGGYPLPEDVKSRVKTALIGPLLADHDTQNLAAQCLAKIAFCE
FPDEWPTLIDQVVQLIESGTAPMGGLQLLKELFADTLSEIQFFGIANQIMTMLHKVVASY
PRNDVKCEAVAVLRVSTNFFAMTDTNNETVYHAIQGWCQLFVPILQQDINKDAYSLNKEI
VLALQDFRNFAPKPFAECILPVFQACLETLQKAANVYRQTLENPDDELVAFLAQLLLFID
IASSQTAVATNIKSSYMEEWTHAIHKCATLSGPKIESWEDFNVFVTEESDLFLGTSLRYN
ALQVIETWCEYININWNVPHNNWLDVESWLYLCNGKAGLPDLVAQSATSNEPILRARAYL
CDPYTCQPDDPSDLAACASLLALIKDSTPDVSAPTIVQTVARLAPDADDDTPAVLCEALV
VAVRKQPNVPNVIPLLFDIVEDDVGNVQTGEQVTSAIDHMSRDVSEQDYLSIAEQCAPYI
TKFLNQAEGGYTSASETAMDVLTNLMNNSPTEVLPHGFVNLFFPALIPFLRSGDADVLQS
TTTVLQVLVERASAEIAAYKVGNESGGQVVVQYIAHLLNPALGDNAPIFIGKLITTVIDK
YHNELGAISTEILDATARRLGTADKPLQVTNLILVFCHFIEESPESVVNLLADMKLETPK
GVQTGLEALLKNWFEKFIYSSTSSLPSVTALGSLFKLQDPRIMEMIVDGRPLPVEAGVVV
TRSMAKRMQTYEQISAQQKIIEMLIEDLKSCENDINRQEQESNAGGHAVPVEEVDEGDDE
WEELDGLDELVHWAQNDAKADLVDNKETMSVLKQFFQTVAANNVGGFYEIWQRLTPQEQA
VVENIAR*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG