YALI0B18436g

Overview

Description weakly similar to uniprot|P53065 Saccharomyces cerevisiae YGL243w TAD1 tRNA-specific adenosine deaminase 1
Locus type CDS
Locus tag YALI0B18436g

Location

Species Yarrowia lipolytica Positions 2415401..2416660
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1260 (nuc.)
Previous locus YALI0B18414g Next locus YALI0B18458g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18436g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18436gYALI0B18436g_mRNA-001YALI0B18436g_CDS-001

Nucleotide sequence

 

>YALI0B18436g
ATGATACCCCAGGTTGTGATAGACAAGTTCAACTCTCTACCCAAGAAGGGGAAGCCGCTG
GTTCGCACCAACAACGTGCCCGAATGGACGACTCTAGCAGGACTAGTGCTGACTAGCACC
ATGGATGACTCGTCCACCTGTGTATGTCTTTGCACAGGTGTCAAGGCCACCCCAGACGAA
AAGTTATCGTGTAGTAATGGCTTTCTACTGCACGATATGCATGCTGAGATTCTCGTTTTA
CGGGCATTCAACGTGTTTCTAATTGAGGAGGGCAAGAAGGCCGAATCTGAGTACGTCGAG
ACTCTCGAGAGCGGGAAAAGGAGACTGAAGCCACATTTCAAGGTCAGTTTATGGATCAGT
GAGCTTCCCTGTGGCGATTCAAGCATGGAATGCATACAGGACAACGCGGATGATGACTGG
GGAGCTGCTCCTCAAGACTGTGTGCTTCGTGGAAGAGAATACTACACCACAACTGGAAGA
GTGCGCACCAAACCAGGCAGAAGGGACTCACCTATGACTCTGTCTAAAAGCTGCAGCGAC
AAGCTGGCCATGAAGCAGTATACTGGGGTGGTAATGGGAGTGGTAGAGCGTGTTTTCGAG
CAGGTGTATCTCGATGAATTGGTGGTTCCAGCTGGTAATGATATTGGAATCAAAAGAGCG
TTCAGAGACAGACTGGAACAGGGCATAAAGCGGACTTTGGACGGAGAGGAAGTGGAGAGC
ACAGCGCCAAAGCCTCGGTACTTTGACACAATCACCACGGATACTACATTTGCATACTCT
CAGGAGCCCGGAAGGAAACCCTCGGCCAGTAGTATCATCTGGACAATCAATACAGGGAAT
GAGGTGGTTTTGAATGGTGTCAAAATGGGCCATAAACCGACAAACATGAATCCACAAAGC
GCATCAAAGGTATCCAGACAGGCCATTTGGATGGCGACTAAACCGTTGTTGAAAGATTCG
CAGTTCGATGATTACTACAGCGCCAAATGCTGTGTCGGCCGTACAGAGAAAATCCAGATG
GGCCATACAGCTCTTCACGCCTGGCATTGCACTTGCAAAGATAATTTTCGCTTGAGTGGT
GACAATGAGAAGGAGACTGGCGATATTCAGCCGGGGATTCTCAACTAATTGTTGGTTACT
CGGTGGGGTCAACTAAGATACTTGAATCACAAACTGAACGAAGGGGCTTCACTCGAGCGC
AGTCTTATTGCTGGACATTGGAGAACAAATAGAACATTATAATGCATTGATTCACACACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18436g_CDS-001

Protein length: 376 aa.
Product: Conserved hypothetical protein

>YALI0B18436g_CDS-001 MIPQVVIDKFNSLPKKGKPLVRTNNVPEWTTLAGLVLTSTMDDSSTCVCLCTGVKATPDE
KLSCSNGFLLHDMHAEILVLRAFNVFLIEEGKKAESEYVETLESGKRRLKPHFKVSLWIS
ELPCGDSSMECIQDNADDDWGAAPQDCVLRGREYYTTTGRVRTKPGRRDSPMTLSKSCSD
KLAMKQYTGVVMGVVERVFEQVYLDELVVPAGNDIGIKRAFRDRLEQGIKRTLDGEEVES
TAPKPRYFDTITTDTTFAYSQEPGRKPSASSIIWTINTGNEVVLNGVKMGHKPTNMNPQS
ASKVSRQAIWMATKPLLKDSQFDDYYSAKCCVGRTEKIQMGHTALHAWHCTCKDNFRLSG
DNEKETGDIQPGILN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG