YALI0B18348g

Overview

Description similar to uniprot|P29952 Saccharomyces cerevisiae YER003c PMI40 mannose-6-phosphate isomerase
Locus type CDS
Locus tag YALI0B18348g

Location

Species Yarrowia lipolytica Positions 2403488..2404889
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1402 (nuc.)
Previous locus YALI0B18326g Next locus YALI0B18370g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B18348g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B18348gYALI0B18348g_mRNA-001YALI0B18348g_CDS-001

Nucleotide sequence

 

>YALI0B18348g
ATGTCGCTTATCCAACTCCAATGCGGAGCACAAACATACGACTGGGGCAAGCTCGGATCC
AGCTCGGCCGTGGCGCGGTTTGCCGCCAAGTCGGACCCTTCTCTCACCATTTCGGAGGAG
ACGCCGTACGCGGAGCTGTGGATGGGCACCCATCCTTCGGTGCCGTCCAAGGTGCTGGGC
GACACAAACAGCACGACTCTGCGTCAGTTGATTTCTGCGTCACCCGACAAGCTGCTGACT
CCCGCCGTGGAGCACAAGTTTGGCCCCGAGCTGCCGTTTCTGTTCAAGGTGCTGTCGATC
CGAAAAGCCCTGAGTATCCAGGCCCATCCCGACAAGGAGCTCGGAGCCCAGCTGCACGCG
TCCGACCCCGCCCACTATCCCGACGCCAACCACAAGCCCGAAATGGCTATTGCTCTTACC
GACTTTGAGGGTTTCTGTGGCTTCCGACCTCTGTCTGAGATTGAGCACTTTCTCGAGACC
GTGCCCGAGTTCCGGGAGCTTGTGGGCGACGAGTCTGCGAAGCAGTTTGCTTCCGAGCGA
TCTGCCGACCCCAAGAAGGCTCTCCAGGCTCTGTTTGGCCGTCTGATGCGGTCTTCAGAC
GACCTCGTGGCCTCCAAGGCCGCTGATCTCGTCAAGCGAGCCGAGTCTGAGGGCCCCAAG
TTCGCAGGTGGCGCTCCCATTGGCGGCACCGATCTCGCCAACCTGCTGGTGCGACTCAAC
GGCCAGTTCCCCAACGACATTGGCCTCTTCTGCGGCGGCCTGATGCTCAACTTTGTGCGT
CTCAACAAGGGTGAGGCCATGTTCCTGCGGGCCAAGGACCCTCACGCCTACATTTCTGGC
GACATCATTGAGTGCATGGCTGCTTCGGATAATGTGGTTCGAGCAGGCTTCACCCCCAAA
TTCAAGGACGTGGACAACCTCGTGGACATGCTCACCTACTCCACTGCCCCCGTGTCCGAG
CAGAAGATGGTGGCTCAGTCGTTTCCCCGGGCCCATGGCGCTACGGCTAAGCTGTTTGAC
CCCCCGATCAACGAGTTTTCCGTGCTGGAGAGCGTTGTGCCCTCAGGAGAGACCCAAACT
GTGGACGGAATCGAGGGTCCCTCTGTGGTGATAATTTCGCAGGGTGCAGGCGAGATCACC
GTGGCTGGCGAGTCCAAGAAGCTTGAGGAGGGCTACGTCTTCTTCATTGGCCCCAACGAG
AAGGTCGAGGTCAAGAGCAGTGGGAAGGAGGACTTGACTCTGTATAGAGCTTTCTGTGAG
GTCAACTAAGATGTGGGCTGAACCGCAACTGAAGTTGGGCTGACTGGTTGGATCATGTAT
TCCACCAGAACAGTGAGCTGGACACTAACACTCTACATATATAGTATAGCTAGTAATAGA
TGGGATTTGGATTAGAGGAATG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B18348g_CDS-001

Protein length: 423 aa.
Product: Mannose-6-phosphate isomerase, putative

>YALI0B18348g_CDS-001 MSLIQLQCGAQTYDWGKLGSSSAVARFAAKSDPSLTISEETPYAELWMGTHPSVPSKVLG
DTNSTTLRQLISASPDKLLTPAVEHKFGPELPFLFKVLSIRKALSIQAHPDKELGAQLHA
SDPAHYPDANHKPEMAIALTDFEGFCGFRPLSEIEHFLETVPEFRELVGDESAKQFASER
SADPKKALQALFGRLMRSSDDLVASKAADLVKRAESEGPKFAGGAPIGGTDLANLLVRLN
GQFPNDIGLFCGGLMLNFVRLNKGEAMFLRAKDPHAYISGDIIECMAASDNVVRAGFTPK
FKDVDNLVDMLTYSTAPVSEQKMVAQSFPRAHGATAKLFDPPINEFSVLESVVPSGETQT
VDGIEGPSVVIISQGAGEITVAGESKKLEEGYVFFIGPNEKVEVKSSGKEDLTLYRAFCE
VN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG