YALI0B03058g

Overview

Description hypothetical protein conserved in the Yarrowia clade
Locus type CDS
Locus tag YALI0B03058g

Location

Species Yarrowia lipolytica Positions 447341..448734
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1394 (nuc.)
Previous locus YALI0B03036g Next locus YALI0B03080g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B03058g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B03058gYALI0B03058g_mRNA-001YALI0B03058g_CDS-001

Nucleotide sequence

 

>YALI0B03058g
ATGAACTCGCAACAAGTATATCAGACGCCATGGAAACACGAGGATAAACGGCGGCTGAGG
GTAGATCATATGACCGCCGCGACTATGAGAAGTGCAGCTGCTACACTGCTACTGGTGCCC
TTGAACACGACCGAACTGGCAGGGCCTGCTCGCGGTCAGCACGTTAAAATGGATGCCTTG
GACGCACTGTGTCTACAGTCATTCATCGACGTGATCGGAGAGGTTTTGGCAGGACTCACA
GAGTACCCCATGACGACAGAGGTACTCCCCCAGATAGCAGTGGAGTGCACGTGTATCATG
CACGCGGCAGTGGCCATTGGCAGCATTGTTCTGGCCAAGAGAGGGACAATAACCGAAGAG
CAGGCCCTGAGGTTGCACGGAAGAGCCACCATGTCTCTTCTACAGGCGCTGACAGCTGTT
CCCAAGGACGACGAGGCGTGTTTGTGTGCCTCTGTGCTGCTCAATATCTACGATCTGTCG
TCAGATGGTGCCCAGGATACTTATATTCATCTCACTGGATCGAGGGCTCTCATGGCTGAT
CTGGATTACACACACGACTCGAACGGCATGCCTACAAAGCTGACACCATTAGCACGTATG
TGTGTTTGGGCCAACATATTCAACGATACCCTGGTGGCCATCAGACACTCGCTTCCCGTG
TTCTGGGACCCAGACGAGTGGTTTGACCTTCTAGGATTGTCATATTGCTCTCCTGAAACA
GCGTCTCCTACATGGTGGTTTCGACGCATCCACTATCTGTTGGCCAAGCTACACACCTTC
TCTTGTGTTCCAAGGGTGCTGACCGAGCAGGAGACGGTTGAGAACGAGCTCCACAAGTCG
TTTCAGGCCCTCTGTGAAGACGCAGACGTGTGGTTCGGCTCAGTACCGGAACCAATGCGA
CCCACTACCGTCATGGAGACTGAAAGCCCGCTCTTTCCGTGCATATACATTGTCGAGCGA
AAAGGAATCACCGCCATGTGCATGTACCACTCATTCATGCTCATTGCCTCGAGGTGTGAT
CCCAGTGTGCCCCTTTCGCAGATGTACATGCGGCAGCCCACAACCGTTCATCACGCCTCG
CGCATCTTTGGTATCGTAAAGACCAATATTTGCGAATGGCTGGCTTCAGGGGCCATGTTT
GCCCTACGAATAGCTCTTGAATCGCTTGTAGAGCCCGCGCATCGAAGCGAGGCTCTTGAA
TTTGTCAAGGGCATGGCTGCCACCTATCATTTGAATATCAGTTCACATATCGACGCAGTC
AGAAGCCACTGGCAGGAATGGGATAATTCTTCCTCTAACGGGTATCACCAATAACTTCCC
TCTGTTTATATTACTGTACTAATACTAATGTAGCAACACTTGTACTCATGAGTAGATTGC
TCCAATACTACAAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B03058g_CDS-001

Protein length: 438 aa.
Product: Hypothetical protein conserved in the Yarrowia clade

>YALI0B03058g_CDS-001 MNSQQVYQTPWKHEDKRRLRVDHMTAATMRSAAATLLLVPLNTTELAGPARGQHVKMDAL
DALCLQSFIDVIGEVLAGLTEYPMTTEVLPQIAVECTCIMHAAVAIGSIVLAKRGTITEE
QALRLHGRATMSLLQALTAVPKDDEACLCASVLLNIYDLSSDGAQDTYIHLTGSRALMAD
LDYTHDSNGMPTKLTPLARMCVWANIFNDTLVAIRHSLPVFWDPDEWFDLLGLSYCSPET
ASPTWWFRRIHYLLAKLHTFSCVPRVLTEQETVENELHKSFQALCEDADVWFGSVPEPMR
PTTVMETESPLFPCIYIVERKGITAMCMYHSFMLIASRCDPSVPLSQMYMRQPTTVHHAS
RIFGIVKTNICEWLASGAMFALRIALESLVEPAHRSEALEFVKGMAATYHLNISSHIDAV
RSHWQEWDNSSSNGYHQ*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG