YALI0B02948g - GPD1

Overview

Description uniprot|Q9UVF4 Yarrowia lipolytica YALI0B02948g GPD1 Glycerol-3- phosphate dehydrogenase [NAD ]
Locus type CDS
Gene name GPD1
Locus tag YALI0B02948g

Location

Species Yarrowia lipolytica Positions 439770..441639
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1870 (nuc.)
Previous locus YALI0B02904g Next locus YALI0B02970g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B02948g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B02948gYALI0B02948g_mRNA-001YALI0B02948g_CDS-001

Nucleotide sequence

 

>YALI0B02948g
TGCGTTTTAAACACATGTCCGCCGTCAACCGTCTCACACAACAGCTTCGACTGCTGACCG
CCTCCGCGCCTCTCAGCGCAGCCAACACCGCCGGCAAGGCTCCTTTCAAGGTCGCCGTTG
TTGGTTCTGGTAACTGGTGAGTAAAAAAAGACAGGAGTTTTCAAGGGATTCAAACGGGGG
TTATATAATATAACCCATCGACAACCGCGACATGGATGCTGAAACGAGAGCAACTAGACA
AACAAACAAGCACGACACAACACATGGAACAGAGAAACACCACAGACCGCAGATACGGCT
TCCTTTGGGTCACCCCCAACAGGAACACATACAGATCATGGTGAAATGGGCAATTCACAG
AACTGGATGAGAAGACAGCAACAGAAGACGACAGAAGAAGTTATACAGTTGCACACGGCT
ACACTGACACGACACGCACCTCCTCTGCACTGCTTAACTCTACGAGTTTAATGAAGTGTT
CGATGGGGAGTTTAGTGGAGTGGCGACAGTGGCAATGCGAGGTCTTCTGGAAGCATTTAA
AAGTGTGAGAGCAATTCTAAGAGTCTCAAGAAGTACTCTATTTGCCTTCTCTTCAAGCCC
CTCCTCCACCTTGAGCCCAGTCTGCTGTGAATGCCGTTATATGTCATCTGTCAGTCATTC
AGCGCATTCGGCGTTGCCCCGTTTGTGACCTTTGGCCACTCACCTCCGCTTACCATACTA
ACATCAGGGGAACCACCGTCGCCAAGATTGTCGCCGAGAACTGCACTGCTCACCCCGAGC
TCTTTGAGCCCGAGGTTCGAGTCTGGGTTCGAGAAGAGAAGGTCAACGGCAAGAACCTGA
CCGACATTTTCAACGCTGAGCACGAGAACGTGCGATACCTCCCTAAAATCAAACTTCCTC
ACAACCTGATCGCCGAGCCGGATCTGCTCAAGGCCGTCGAGGGTGCCAACATCATCGTCT
TCAACCTGCCCCATCAGTTCCTGGCTGGTGTCTGCAAGCAGCTCAAGGGCCACGTCAACC
CCAAGGCTAGAGCCATCTCCTGCCTCAAGGGTCTAGATGTCACCCCCCAGGGTGTTTACC
TGCTCTCCGACGTTATCGAGAACGAGACCGGTCTCCACTGCGGTGTTCTGTCCGGGGCTA
ACCTCGCCACCGAGATCGCTCTGGAGAAGTACTCCGAGACTACCGTTGCTTACAACCGAC
CCAAGGACTTCTTTGGCGAGGGTGATGTGACCAACGATGTGCTCAAGGCTCTGTTCCACC
GACCCTACTTCCATGTGCGATGCGTTCAGGACGTCGCCGGTGTCTCCATCGGAGGTGCCC
TTAAGAACGTTGTTGCCCTTTGCGCCGGTTTCGTCGAGGGCAAGAACTGGGGAGACAACG
CCAAGGCCGCAATTATGCGACGAGGCATGCTTGAGATGATCAACTTCTCCAAGCGATTCT
TCCCCGAAACTGATATTAACACTCTTACAGTCGAGTCTGCCGGTGTGGCCGATCTCATCA
CCTCGTGCGCTGGAGGCCGAAACTTCAAGGTCGGCCGAGCATTCGGAAAGGAGAGCGGCT
CCGGCAAGACCATCCAGGACGTGGAGAAGGAGCTTCTCAACGGCCAGTCCGCCCAGGGCG
TCATCACATGCAACGAGGTCCACGAGCTGCTCAAGAACAAGAACATGCAGAAGGACTTCC
CTCTGTTCGAGTCCACCTGGGGCATTATCCACGGTGAGCTCAAGATTGATGATCTCCCCG
AGATTCTTTACCACGCCAACTAGATAGATAGACTGTATTTTATTGCATATGAAAAAGAAG
GAAAAGTCTGCGAGCGTAGCGGATGTAGATGTATCGTGATATCACGAAATTTCAGGTTAT
GTTCTTCTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B02948g_CDS-001

Protein length: 386 aa.
Product: Glycerol-3- phosphate dehydrogenase [NAD ]
Gene: GPD1

>YALI0B02948g_CDS-001 MSAVNRLTQQLRLLTASAPLSAANTAGKAPFKVAVVGSGNWGTTVAKIVAENCTAHPELF
EPEVRVWVREEKVNGKNLTDIFNAEHENVRYLPKIKLPHNLIAEPDLLKAVEGANIIVFN
LPHQFLAGVCKQLKGHVNPKARAISCLKGLDVTPQGVYLLSDVIENETGLHCGVLSGANL
ATEIALEKYSETTVAYNRPKDFFGEGDVTNDVLKALFHRPYFHVRCVQDVAGVSIGGALK
NVVALCAGFVEGKNWGDNAKAAIMRRGMLEMINFSKRFFPETDINTLTVESAGVADLITS
CAGGRNFKVGRAFGKESGSGKTIQDVEKELLNGQSAQGVITCNEVHELLKNKNMQKDFPL
FESTWGIIHGELKIDDLPEILYHAN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG