YALI0B02178g - AAT2

Overview

Description uniprot|Q6CFZ7 Yarrowia lipolytica YALI0B02178g AAT2 Aspartate aminotransferase
Locus type CDS
Gene name AAT2
Locus tag YALI0B02178g

Location

Species Yarrowia lipolytica Positions 316199..317662
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 1464 (nuc.)
Previous locus YALI0B02167r Next locus YALI0B02200g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B02178g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B02178gYALI0B02178g_mRNA-001YALI0B02178g_CDS-001

Nucleotide sequence

 

>YALI0B02178g
ATGCTCCGAACCATCGCCCGAACCCACGCTGTGGCCGCCACCAAGGTCGTGCGAGCCTCC
ACTTTTTCTGCCACCCCCGCCGCCTCTTTTGTGCGATTCCAGTCCGTCTGGGCCAAGGTC
CCCCAGGGTCCCCCCGACGCCATTCTCGGAATCACCGAGGCGTTCAAGAAGGACGCCTTT
GAGCAGAAGATCAACCTCGGTGTTGGCGCCTACCGAGATGACGGCGGAAAGCCCTTCGTT
CTTCCCTCCGTCCGAGAGGCCGAGAAGGAGGTGGTGAACAAGGCCCTCGACAAGGAGTAC
GCCCCCATCACCGGAGTCCCCGCCTTCACCAAGGCTGCTGCCGAGCTCGCTTACGGCGCC
GACTCCCCCGCCGTCCTCGAGGACCGAATTGCCATCACCCAGACCATCTCCGGTACCGGT
GCTCTGCGAATCGGAGCCGAGTTCCTCAACAAGTTCTACTCCTCCAAGAAGATTCTGCTC
CCCCAGCCTTCTTGGGCTAACCACAAGGCCGTTTTCACCGCCGCCGGCCTCGAGCCCGCC
ACCTACCGGTACTACGACCCCAAGAACATTGCCCTCGACTTTGAGGGTCTGCTCGCCGAC
CTGGAGGCTGCCCCCAACGGAACCGCCGTCCTTCTGCACGCCTGTGCCCACAACCCCACC
GGTGTTGACCCCACTCCCGAGCAGTGGCGAAAGATTGAGGAGGTCGTCAAGGCCAAGGGC
CACTTCCCCTTCTTCGACATGGCCTACCAGGGCTTTGCCACCGGTGACGTCAACCGAGAC
GCCTACCCCATCCGATACTTTGTCGAGCAGGGCCACGAGGTTGCTCTGTGCCAGTCCTTC
GCCAAGAACATGGGTCTTTACGGTGAGCGAGTCGGTGCTTTCTCTCTTGTCTGCCAGGAC
ACCGCCGAGAAGAACCGAGTTGACTCTCAGCTGAAGATTATCATCCGACCCTTCTACTCC
AACCCCCCCGTCCACGGTGCCCGAATCGCCGCCACCATCCTCAACAACCCCGAGCTCAAG
AAGCAGTGGCTCGGTGAGGTCAAGCAGATGGCCGACCGAATGATCAAGATGCGAGCTCTG
CTCAAGGAGAACCTCGAGAGACTTGGCTCCCAGCAGAACTGGGACCACGTCACCTCTCAG
ATTGGTATGTTCTGCTACACCGGTCTGTCTCCTGAGCAGGTTGAGCGACTTGCCAAGGAG
TTCTCCGTCTACGGAACCAAGGACGGCCGAATCTCCATTGCCGGAATCACCTCTCAGAAC
GTCGGCCGACTGGCCCAGGCTATCTACGAGGTGACCAAATAGATTATGATTAACGAGTAA
TGAGATGAACGTGCGCGATGATGCAGACACCCAGTGCCGCGTCCGACCGTGTGATTGAAT
GAGTATTGAACTGGAACCGTAGTGGCAGTAAGTGACAGCAAGAGTGCCCATTCATAGAAT
CTAGGTGAATGACCTTTCTTTTTA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B02178g_CDS-001

Protein length: 434 aa.
Product: Aspartate aminotransferase
Gene: AAT2

>YALI0B02178g_CDS-001 MLRTIARTHAVAATKVVRASTFSATPAASFVRFQSVWAKVPQGPPDAILGITEAFKKDAF
EQKINLGVGAYRDDGGKPFVLPSVREAEKEVVNKALDKEYAPITGVPAFTKAAAELAYGA
DSPAVLEDRIAITQTISGTGALRIGAEFLNKFYSSKKILLPQPSWANHKAVFTAAGLEPA
TYRYYDPKNIALDFEGLLADLEAAPNGTAVLLHACAHNPTGVDPTPEQWRKIEEVVKAKG
HFPFFDMAYQGFATGDVNRDAYPIRYFVEQGHEVALCQSFAKNMGLYGERVGAFSLVCQD
TAEKNRVDSQLKIIIRPFYSNPPVHGARIAATILNNPELKKQWLGEVKQMADRMIKMRAL
LKENLERLGSQQNWDHVTSQIGMFCYTGLSPEQVERLAKEFSVYGTKDGRISIAGITSQN
VGRLAQAIYEVTK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG