YALI0B01870g

Overview

Description weakly similar to uniprot|Q12315 Saccharomyces cerevisiae YDL207w RNA export factor GLE1
Locus type CDS
Locus tag YALI0B01870g

Location

Species Yarrowia lipolytica Positions 281724..283866
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 2143 (nuc.)
Previous locus YALI0B01848g Next locus YALI0B01892g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01870g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01870gYALI0B01870g_mRNA-001YALI0B01870g_CDS-001

Nucleotide sequence

 

>YALI0B01870g
ATGAAATTCAGCCCATTGAGACCGGCGGTGTTGACGCGGATTCCGAATTTCGAAGACGGA
TACGACCCGCTATGGGACGATGAGGAGCTGTCGCAGGAAATCAGTCAGTACGAGATGTCT
CTGGAGGAAGAAGGCACACCCAGTAAGCCTCCTCGGAAGACTCCTTCTCAGTCGAGATTT
GCAACGGAGTACAGTGCCTCGAACAGTCCGACTCGGCCGACGAAACCGGCAGTGTCATCT
CCTTTGAAGCAGGAGCACAGAGACGAGACTCAGGACGTCAAAGAAGACTCATATCGCTCT
ATCCACGATCTGTCTTGTGCAGAGTGGGAGGGTACATTGAACCGGGTGTCACTTATCCTT
GATCAATGTCATCTGAGTCCCGTTGGAAATTTCAAGCGGGGTCATAGACGGGGTTCCAGT
GTTAACAGTGTGTCTCTGGGTTCCCCGGTCGACCCTGCGGCTGCCATTGATTGGGGAGCT
CCTTTAGCTCAGGTCGAGAAGGAACTCCAACATGTGGAGGACGTGTGGGCGTCTGAGGAG
CTCAAACGACACAATGACGTGGCTCGACGGGAGTCTGTGTTTATGTCTCGGATGGGAGAC
GATCGGCTCAAGCAATCTGATGAGCTGGCCAAGAAGCGGGAAAAGAGAAACAGCGTGATT
GTGGGCGGGTTGGTTGATCAATGGGAGGCTGAGAGACGGGAAGAAGAGCGGCAAAGGCTG
GAGGCCGAGAGGAAGGAGCGTGAGAGGATTGAGCGTGAGAGAGTGGAGGCTGAGAGGAAG
GAAAAAGAACGACTTGCGAAAGAGAAGGAGGAAGCTGAGAGACTCGAACAGGAACGACTT
GCGAAAGAAAAGGCCGAAAAGGAGGCGGCCGAGAAAAAGAGAATCGAAGCCGAACGTTTG
GCCAAGGAAAAAGCAGAGAAGGAAGAAAAGGAACGTCTGGAAGCGGAAGAACAAGCCAGA
AAGGACAAACTGGGCCAGTTTACAAACTGGAGAGCGGTCGATAAGGAATTCCTCCAGTGG
AAGGCCAAAATTGAACAAATCAAGAAGGACATCAAGGAACCGGTGGCCAACAATGCCGAA
GTCAAGAAATTGTGCAATAAATGCAAGCGCCAAATCAACCCCAAGTTCGGACAGCTCACG
CCTTCAGTTACACACACAAAACAGATCAGTGAAGACTTTGTACAGATTTTCAATGAGGCC
AAGCAGCACAGTGAGCTCGTCTACCTCTGGCTCCTCAACTTCTTTGCCAAGAGCATTGTT
CGACAGGCTGAAAACGAAACCATTGTCGCTCCTCAGAGTGCCCTTCCCTTAGGAATGTTG
GCCGCAAAGATCATGTCTGTGTTTCCGGAGCTCACCGATCTCATGGTTGCTCGGTTCGTC
AAGAAATGTCCCTTTGTGATTGGCTTCACTTGTGACATTGACACCGAGCAAGGACGAGAA
CGCATGGCCTGGAGAAAGCCTGGAGGAAAGTGGGAAGACGAGACTGTGTACTCTGAGCGA
ATGGGTGGAATTGCTTCAGTGTATGTTGCTATCACCCAGATCAGATTTACTGCACCCGCC
GAAAACCCCAGACCCATTTCCTACAGCTGGACCATGATTGCTAGGTTGTTGAATACGGAG
ACAGAGAAACTGACTAACACGCATTTCACGGTTGCCGCTTCATGGTGGGAGGTGATTGCT
GTGAGATTCCTGGCCACGTACGGCATACAGGGCAGAAAGATGTTGCACGCTGCATGGGAT
CCTTGGACCGCTAGTTGCGGAGATAAGAGGTTTCCTGCGGGTGCGAGACTGAGATTGATG
GGTGAGGAGTGGCAGAAGACAGGTAATGTGAAGGGACTTACGCCAATGTCGAAGAATTAA
TGAGGAGAGATTGGAGAAGGGGTTGGACGAGAGCACGCAAGAGCGAGCAAGAACGGACAG
AGAGCTCAACTCGAAAAATGTACCCACCAAAGTACGCGAGAAGCGCATGGCGACTTTGAC
AACATATCCTGCTCGCTACGACGATTTGGTGTTCATGGCCGTCTTTATGAAATCTACGGC
TGCTGACCTAGGTATGGGCTAGACTGTCGTCTTGATGCGACGACGTGATAACTAGAGCAA
CTTTTCACTATAACGATGGCATTTGATTGATTTATATAACAGT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01870g_CDS-001

Protein length: 620 aa.
Product: Conserved hypothetical protein

>YALI0B01870g_CDS-001 MKFSPLRPAVLTRIPNFEDGYDPLWDDEELSQEISQYEMSLEEEGTPSKPPRKTPSQSRF
ATEYSASNSPTRPTKPAVSSPLKQEHRDETQDVKEDSYRSIHDLSCAEWEGTLNRVSLIL
DQCHLSPVGNFKRGHRRGSSVNSVSLGSPVDPAAAIDWGAPLAQVEKELQHVEDVWASEE
LKRHNDVARRESVFMSRMGDDRLKQSDELAKKREKRNSVIVGGLVDQWEAERREEERQRL
EAERKERERIERERVEAERKEKERLAKEKEEAERLEQERLAKEKAEKEAAEKKRIEAERL
AKEKAEKEEKERLEAEEQARKDKLGQFTNWRAVDKEFLQWKAKIEQIKKDIKEPVANNAE
VKKLCNKCKRQINPKFGQLTPSVTHTKQISEDFVQIFNEAKQHSELVYLWLLNFFAKSIV
RQAENETIVAPQSALPLGMLAAKIMSVFPELTDLMVARFVKKCPFVIGFTCDIDTEQGRE
RMAWRKPGGKWEDETVYSERMGGIASVYVAITQIRFTAPAENPRPISYSWTMIARLLNTE
TEKLTNTHFTVAASWWEVIAVRFLATYGIQGRKMLHAAWDPWTASCGDKRFPAGARLRLM
GEEWQKTGNVKGLTPMSKN*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG