YALI0B01320g

Overview

Description some similarities with uniprot|C4R7I5 Komagataella pastoris PAS_chr4_0317 hypothetical protein
Locus type CDS
Locus tag YALI0B01320g

Location

Species Yarrowia lipolytica Positions 219282..222032
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 2751 (nuc.)
Previous locus YALI0B01298g Next locus YALI0B01342g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01320g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01320gYALI0B01320g_mRNA-001YALI0B01320g_CDS-001

Nucleotide sequence

 

>YALI0B01320g
ATGCCAAAAAACGCTCTACTTCGATCGGCGCGCCAGGTGGCCATCTCGCGCGTCTTTGCC
ACGTCACGTGCCTCCCACGTGGTGTCGCACGCTCCGATTCTGGCCTCGGTTCGACCCAGA
TCAAACCCGGCGCCCTACAGGCGAAACTTTTCGTCCTCCAGAGCTCTCAGAAACGACTAC
GGATTGGATACGGCCGAGCGAAGTCTCAAGGAGAGTCTCGTGCCATTCAATGGTGCGCCC
GTGGACCGAAAAGTGGTGCGGGATCAATTGATGGAACTCATCTCTGTGTCCCCCGGACAG
GTGTTTCCCATCTCCGTGATCCCCGTGGTAAAAAGCGCCTACTACGAGCTGTTCCGGGAA
AACGAACGGGTCCTGTCTGCGGGCGACACAAAGACGCTGTTTGGCGCCGTGGCCGGCAAC
AACCCAGAAGACGTGCAGGACCTACCATTTGTTCTGGCGGTGTACCACCAGGCCGAGCAG
GCTGCCGAGACGAATCGGGACTCACGTGACAACATTTTGCTGCTGGGCAAGTATTTTCTG
TTCCAGGACAGGCTCGACAACTTTTGGAAGCTGCTCGAGGCCCAGATCAAAACCCATGAC
GACGTGGACGCGGGTTTTGTGAAGCAGCTGCTGGAGTTGATCTCCGTCGACCCTCATCTG
ACTCTCGGCAATGTCGCCCGAGTGCTCCAGCTCAAGACCGACAACCATGTCTCCTCGTCG
GACGAGCTGCGAAATGCTCTCTCAGCCACCCTTGAACAGCTCTACTACAAGGAGAACGAA
GGGTCCGAGTTTTTTCTCTCGCTGGTGGAGAACCACATTCTAGATTCCAAGGACTTTACT
CCCTCTGACAGCGTTGTTGCCATGATTCTGAACACGTGTGTGAACGAAGGACGTGAGGAT
CTGGGCCAGAGTGTGCTCCGAAACGTCGTATCAAGGGTCGGTAATCTTTCCCCCGGCCAG
GAAGACCCTCAGAACTGCTGGGGTTTCTGGTCTTCGGTTGCCATGGACCTGCACGGCTCC
AAAACTGACGTCAAGGCTTTCATTTCTCGTCTGGAAGCCCTTCCCCATCGAACCAAGGCC
ACGTGGGACATTTTGATTCGATACGCCGTCTTCAAGGCCGATCTGGCGGGCCGAAACGAT
CTTCTGCAGGTCAGAGCTCTGCTGGCGGAAATGCAAAAGGTGGGGTTCGAACCAGATGCC
GAGACCTACTTTGACGCGTACCGATCGTCCAAATCCATCAAACCCGACGTGGTCCACCTG
TTTGAAGCCGAACTGGACATTGAAAAAGATACGTCCATCTTTGCCATCGAAATGGACAAG
GCGCTCAAGAACCACGACACTCTAGAAGCACTGTCCATCTTCTACGAGTCGTTCGAACAG
GGCGCTCAATGGGAAAACAAACGGCTTCACATGGAGGCCATGACGGAGTTGCTGATTCAG
TATGCGGGCTTGAACGACACTTCTGTGGCCGATATTCTGCAGCTGGTGCAGCGAATCGAG
CCCATTTGTGCCCAGGGTCGAATCCCCTACTCTGCCGAAACCGCCATTGCCCAGAATGTG
CTTCAGCGGCACAGTGACACCGCCAATTTCTACACGTTCATGAACCGACAGTACGGCAAC
ACCGCAGACAAGGTAACCAAGCAGGACCCCCAGATCCGCCCTCACACCTACCAGGTCATC
CACGATTACATTTACAGCTGTGAGTCTGAGCGAGCAGATCTGGCGTGGGAGATGTACGGG
CTGCTGCACAAGTTCTATGTGGTTCCCTTTGCCGACTACTACAAGGCGATCAAGTTTTTT
GCCCAGGACGTGAAACGGCAGGATTACGCACTTCTGACGTTCCAGCAAATTCGAAAGAAC
CATGATCTGCACGGCCAGCCGGCAGCCACATCGGAAATGGTGGCTTTCCTGTTCCACGAG
TTTGCCAAGACCAAGTACAAGCGGGGAATCAAACGTTTGCACGAGGTGGTTGCTCTGGAA
ACGTCGTTTGATGTCAACCGAGATGTGTTGAACGAAATGATGGCGGCATATGTGTCTGTG
GAGGATCTGAATCGAGTTCAGGACTGTTGGGCTCAGTTGCAGCAGCTTCCTCCTTCCATT
GGCGCTAACAACCGTTCGGTGGATGTTCTTCTGAGCTACTTCAAAGACAACATTCACTAC
ACTGAGCGAACTTGGCAGGGTATTCCTGAGTTTGGTCTGCTTCCCACCTTGGAGAACTAC
GAGCAGTATTTGATCAACAACTGTCGAACCGGCAACTACCGCCGAGCTCTCGAGATCACC
AAGAACATGGAGATTGACAGTGGTCTGAAGCCTACCGCGAAAATCATTGCCGCAGTGTAC
AACTACACGTTTACCGAGCAGCGCAAGCTGGAGGTGGAGCAGTGGGCGGAGAAGGCTCAT
CCGGAAATGTGGTTGGAGCTGAAGGAGGGCGACAAGCTGAAGAGCTTGTGTTTGCCGGCC
AACAGCGACAACGATAATGTCGAGAGTTTGCTCAAGCAGGCGTCGGCTGATATGGACGAG
GAGATGAGTGGGGGCATTGTCAAGGTGGAGAGCGTTTAGCGCCTTCAGGGGCGACGAAGG
ATGCGGGCGAGGCGTATTGAGCGTACCGAGCGTATCGAGCGTATCGAGCGTATCCACTGG
TTTGACTAGACAGCTTCAGATCTGTCCCGATGCTGGTGTGCGATACACCATTTGTATATA
TTTTAAAAGTTATGTGATTGATAGGCTGAATGCATCAATGATCTGGATCGA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01320g_CDS-001

Protein length: 853 aa.
Product: Conserved hypothetical protein

>YALI0B01320g_CDS-001 MPKNALLRSARQVAISRVFATSRASHVVSHAPILASVRPRSNPAPYRRNFSSSRALRNDY
GLDTAERSLKESLVPFNGAPVDRKVVRDQLMELISVSPGQVFPISVIPVVKSAYYELFRE
NERVLSAGDTKTLFGAVAGNNPEDVQDLPFVLAVYHQAEQAAETNRDSRDNILLLGKYFL
FQDRLDNFWKLLEAQIKTHDDVDAGFVKQLLELISVDPHLTLGNVARVLQLKTDNHVSSS
DELRNALSATLEQLYYKENEGSEFFLSLVENHILDSKDFTPSDSVVAMILNTCVNEGRED
LGQSVLRNVVSRVGNLSPGQEDPQNCWGFWSSVAMDLHGSKTDVKAFISRLEALPHRTKA
TWDILIRYAVFKADLAGRNDLLQVRALLAEMQKVGFEPDAETYFDAYRSSKSIKPDVVHL
FEAELDIEKDTSIFAIEMDKALKNHDTLEALSIFYESFEQGAQWENKRLHMEAMTELLIQ
YAGLNDTSVADILQLVQRIEPICAQGRIPYSAETAIAQNVLQRHSDTANFYTFMNRQYGN
TADKVTKQDPQIRPHTYQVIHDYIYSCESERADLAWEMYGLLHKFYVVPFADYYKAIKFF
AQDVKRQDYALLTFQQIRKNHDLHGQPAATSEMVAFLFHEFAKTKYKRGIKRLHEVVALE
TSFDVNRDVLNEMMAAYVSVEDLNRVQDCWAQLQQLPPSIGANNRSVDVLLSYFKDNIHY
TERTWQGIPEFGLLPTLENYEQYLINNCRTGNYRRALEITKNMEIDSGLKPTAKIIAAVY
NYTFTEQRKLEVEQWAEKAHPEMWLELKEGDKLKSLCLPANSDNDNVESLLKQASADMDE
EMSGGIVKVESV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG