YALI0B01276g

Overview

Description weakly similar to uniprot|P53294 Saccharomyces cerevisiae YGR169c similarity to RIB2P
Locus type CDS
Locus tag YALI0B01276g

Location

Species Yarrowia lipolytica Positions 212223..214062
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 1840 (nuc.)
Previous locus YALI0B01265r Next locus YALI0B01298g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B01276g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B01276gYALI0B01276g_mRNA-001YALI0B01276g_CDS-001

Nucleotide sequence

 

>YALI0B01276g
ATGACATACTCCTTCTCCAAAGGATTTCGTCACGTGATTCCCTACTATTACACACACTCA
ATCCCGAGCAAAGGCCGGTGGTTTGGAAAAACCGTACTTGACGTTCTCTCCACCGAGTTC
TCCTCCGTATACCCCTCGGACCATCTGAGACAAACAATCGATGCAGGAAACATCAAGTTG
ATTCGCAGAGACAAGCTGAGCGAGCCCGCAACAGAATACACAGATTGGGAGTCTTTGTCG
ACCCACGTGTTCAAAAACGGCTCGATTCTGGAGAGTCGAGTGCATAGACATGAACCGGCA
GTTCCAACAAGGGACGAGAAGCCCATCAGAATCGTGTTTGAAAACGATGCGCTTGTGGTG
GTCGACAAACCAGGAGGAATTCCGGTTCATCCGACCGGAAAGTATTTGTTCAACTCGGTC
AAGGAGATTTTGAAACATGAAACGGGATTGGAGGAATTATATCCGGCCCACAGACTCGAC
AAAAACACCACCGGAGTGCTGGTATTTGCAAAAACAAGTGAATCGGTCAACCACGTGACC
CAGCAGATTATGAGCCGCTCGGCCAAAAAGGAGTATCTGGCTCGAGTCAAGGGCAGGTTT
CCCCCCGGGCGAGTAGAGACTCACCACCCGGTGGTGGAAAACACCATCAAACGAAATGTA
CAGCCAAAAGACGCCCATACGGCTTTTGAGCGAGTCGCATACGACGAGCACCGTGACCTC
AGCATCGTCCGATGTCTTCCTTCTACTGGTAGAAATCATCAAATTCGGCAGCATTTGTTA
CATCTTGGATATCCTATCGAGAACGATAGGGAGTACAATCCGGAGTTGGCGGGTGTCAAG
AGGAGGAAGAAGGTTGAAGAGGGGGTTTGTGACCAATGTGGGTTACCTATTTATCAGGAT
TACCACGATGAGTTGTATTTGCATGCCCAAAAGTACACGTTGGAGGAAGGTGTTTTTGAG
ACTGAGGTGCCCGAGTGGGCTGAGTTGAAAGACTCCAAAGGGACCGAGTGGTGAAGAGTG
GTTGAATGATGAGGATATACGGTGTGTGTCAATTCAACTTGGTGATTTGAGCTCTGCAAG
ACAATCTGAAAGACCATCTCAAAGACATTCTGAAAGACAATTGTGGAGTTGTAAGTATCA
ACAAAAGGAAAAAAATACAGGAGATAATGATAAATGGAGGGTTTTTTCTCGGAGAAATCA
CAGTTACGTGACCAAAACGATATCCACAGCGCTCCGATTTTGATGTTTTTCCGGCCCTTC
ATGTCTATTGCGGCTTTGAGCGGGTTTCCAAAGGGTTCATAAGTTCACTGGGCTCATTGA
GGGTCTAGAATGAGTGTCAGTCGAGTTCCAGGTGTTTAACAATCACTTATTCAGATACGA
TTTGAATCCATGAGTGGGTCGCCTCTGAACTAGCGTGTACCCAAAAACATACAGAAAACG
ACTCAATTGCGGGATTTTGGGCTCAATTGCGGGATTTTGGGCTCAATTGCGGGCTTATGG
GCTCAATTGCGGACGACGGACTCAATCTAGATGTTTGGACTCAATTTCGACGTTTGGACT
CAAAGATTGACCCGTCCCGTAGTCGTCTCTGTCTGATGTAGAACACTTTTCAGATCAAGA
CGACACTATAAGAACATTGGAAGGGATGTTGGGTTAAATCGGGGGAGAGAATATCACAGA
AGAAGTTCGGCTCTGCAATATGGGTTTTGAGCAGCGTGGACTGATACTGGAAGTGGAGTT
GGTCGTATGAGCTTAGGTGGTGGAAATATAGTGCGTCTAACAGAAGCTGAGAGGGAGATA
TGGAGACGATATAGGTACCAGTGCGATAAGTTCATGTGAT

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B01276g_CDS-001

Protein length: 338 aa.
Product: Conserved hypothetical protein

>YALI0B01276g_CDS-001 MTYSFSKGFRHVIPYYYTHSIPSKGRWFGKTVLDVLSTEFSSVYPSDHLRQTIDAGNIKL
IRRDKLSEPATEYTDWESLSTHVFKNGSILESRVHRHEPAVPTRDEKPIRIVFENDALVV
VDKPGGIPVHPTGKYLFNSVKEILKHETGLEELYPAHRLDKNTTGVLVFAKTSESVNHVT
QQIMSRSAKKEYLARVKGRFPPGRVETHHPVVENTIKRNVQPKDAHTAFERVAYDEHRDL
SIVRCLPSTGRNHQIRQHLLHLGYPIENDREYNPELAGVKRRKKVEEGVCDQCGLPIYQD
YHDELYLHAQKYTLEEGVFETEVPEWAELKDSKGTEW*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG