YALI0B00550g

Overview

Description weakly similar to uniprot|B2W8G2 Pyrenophora tritici-repentis PTRG_06270 conserved hypothetical protein
Locus type CDS
Locus tag YALI0B00550g

Location

Species Yarrowia lipolytica Positions 49858..50759
Strain CLIB 122 Strand Sense
Chromosome YALI0B Total length 902 (nuc.)
Previous locus YALI0B00528g Next locus YALI0B00572g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B00550g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B00550gYALI0B00550g_mRNA-001YALI0B00550g_CDS-001

Nucleotide sequence

 

>YALI0B00550g
ATGGAACGCCTATCCGTCGACACATCGCGATCCAGCATCGACAATAAGCGAAACACAAAA
CGAAATGCTCTGCGGGAATTCTACAAACTACAACAACCCGCCGCGGACCCGGACTCCTCC
CTCATAGCGTCGTCTGTCATTTCTTCTGCGCGAACCAGCATCTCGGATATCACCAGCGTC
GTTGGAGAAGAGGATTTCGAGGCGGAGGAGCGACGGTTGGAGGCCAAGTTTGAAGCCGGC
AGTTTTGATGCCGAGGAGATTGCCCGTGACATTCTGTCGTCTCGCGGCAGCGGGTCCCGT
GTGCTCAAGGACCTGCTCAAGAAGGAAAACTCGCTGCTTCAGAGCATCCGGGTACTGCAG
TCGGAACAAAAGGCGCTTGTCTATAACAATTATTCCCGTCTGATTGCCGTGAGCGAGACT
CTGGCTAAAATGAAGGACGGCAACCTCGACAAGAAGACGGACGAGATTTCCATTGTGATT
GGCGACGAGCAAGAGACGGCCCAGCCGATCGAAAAGACCCGCGCAAAGCTGCCGGGACTG
ATCCAGGAGATTTCCACGGCGTCTCGAGACCTCAAAATGGACGGAGTGGGGGACAAGGTC
GGGGCCAAACAGGTGGCTCAGTGGCTCCTTAACACGCCAAAGGAGGTGGAGCAATTGGAG
GGACAGGAGAGAGACAAGAGGATAGATGAAAGTCTCAAGGTACTGGAATTGTGGATGGAG
AGGAGTCGAGTGGGGGGGTTGGAGGAGTTGAAGGGGAGGATCGAAGGGTTGAGACACTAG
CAGAGCGAAAGTAGGAGAGACTAGTGTTGGCTGCTGTCACGTTTTGACTTTGAGTCCAAT
ATTTAATACTGAATGTTTAATGACAATTGGTGGATACTATTACTATCGAGTATCTATATC
TA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B00550g_CDS-001

Protein length: 260 aa.
Product: Conserved hypothetical protein

>YALI0B00550g_CDS-001 MERLSVDTSRSSIDNKRNTKRNALREFYKLQQPAADPDSSLIASSVISSARTSISDITSV
VGEEDFEAEERRLEAKFEAGSFDAEEIARDILSSRGSGSRVLKDLLKKENSLLQSIRVLQ
SEQKALVYNNYSRLIAVSETLAKMKDGNLDKKTDEISIVIGDEQETAQPIEKTRAKLPGL
IQEISTASRDLKMDGVGDKVGAKQVAQWLLNTPKEVEQLEGQERDKRIDESLKVLELWME
RSRVGGLEELKGRIEGLRH*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG