YALI0B00528g

Overview

Description similar to uniprot|P33339 Saccharomyces cerevisiae YGR047C TFC4 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC)
Locus type CDS
Locus tag YALI0B00528g

Location

Species Yarrowia lipolytica Positions 45625..48512
Strain CLIB 122 Strand Antisense
Chromosome YALI0B Total length 2888 (nuc.)
Previous locus YALI0B00484r Next locus YALI0B00550g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0B00528g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0B00528gYALI0B00528g_mRNA-001YALI0B00528g_CDS-001

Nucleotide sequence

 

>YALI0B00528g
ATGAACTACGACGATTTACGCGACCAATTTTCGGACTACGAGGACGACGACGACTTTGAT
GTGGGACAGGAGCGGTATGAGAGCGACGGCGACGGCGACGGCGATGAGCTCGGCGATCTT
GACAATCTGGACGCGTTACCGAAGCGGTTACAAGAGATTGTTGGGGGCGGGATTCCGGGC
GGGAGTGGGTCTGCAAGCGGCAAAAAGAAGCGAGGAAGAGGCCGAGTGTCGATTGTGGAC
CGGGAGCCTGCTCCGGAGGTGAAAATGTATCTGGCTCAGGCGTCGGAATGCTACATCAAC
AAGCAGCTTGATAAGGCGATTGAATTGCTTGGTAGGGCGGTTCAACTCGATCCCAAGGCG
TACCAGGCGTTCAAGTTGCTAGTGACCATCTATGACGAGCTTGGAGACGCCGATCGTGCT
CTTACCGCCAATCTTGCCGCGGCCATTCTCAACCATCGGGCCAAAGAAGATTGGTTGGCT
GCTGCTGAGCGGTCCCACGCCATCGGAGGCGCACGGATGCTCGACCAGGCCATTTATTGC
TACTCCAAGGTGATTCAGGTCGACCCAGGAGATGAGTCGGCTCTTACCGAGAGAGCGGGG
CTTTATATGGACAAAGATATGTGGAAAAAGGCTGAACAGGATCTCAAGCGACTGCTGGAG
ATGCAGCCCGGCGACGAGGCGGTGGTCCGGACCCTCGGGTACGTTTACACTCGGCAGGGA
AGAGAAGCCGATGCTATCGAGCTGTATGAGGGCATTCTTCAGGAGAGACTCGAGAGTCGA
GCTGGAGAAAATGAGGTACTACAACCGTTCACCTTCACACAGCTCAATTATCTACTGGAC
ATGTATGTTCGGACTGAATCATGGGGTAAAGTGTTGATCAAGGGCAAAGCTGTGGCTCGG
TGGTTGCTAGGACGTGCCGACGAGACCTACTGGGATGAGCATGCTCTGGAGACTGATGCC
GAGTTTGACGAGCGACGAAAATCCGTCAAACGCAGTCAGAATCGCGATCCAGAGAGCTAT
CGTCTTCCGGTGGAGATCCGAAGTCACATTTGCATTGCTCGACTCAAAATGGGCGATGCA
AATGGACTTCAGGAGGCCAGACATCATCTGGATATGTTTTTAGAGGAGGATAGTGCTGTT
TTTGCCGACATTTTCCTGACTCTGGGCCAGGCGTTCCTGAACGCCAATCTTTACGCCGAA
GCTTTGGATCTGTTGACTCCTTTGGTTCGTCATGATGCAGATGTCGTTTCCCAGACTGAC
CTGTATCTTGCTTTGGCCTCGGCTCTGCACCATTTGGGCCATTATGAAGATGCCGAGCAG
GCGTATCTAACCGTGTCCAACATTGACCCCAACAATGTGGACGCCATGCTGGGTCTGGCA
GAGTCGTATCATTTTCAGGAACGGTACGATGAATGTACGTCGATTGTAGACGAGATTCGA
GACTTGCGGGCGAAGCAGAAACGGGAGGAGTTGGAGGAAGAGGTTGGAGATGGAGATGAG
GAGTCCGGGGTTGTTTTTGTTGCTAGACAGAGACCCAGCACCAAACCCAGCGTCAAGGAG
AAGGAGTTGCTTGAGCGAAAGGCGACCGAGGCGTGCAAGGAAAAGTTTGCTGCTTTGGAG
CGTCAGCGAGCCGGGCTTCTCCAGGGTAATGCGGTGGCTGTCTACGAGTGGATGACAATT
GCTTCTGAGCTGGTCGACTCCTTCTCCTCTGTGAGACAGTTTTATCCTTCTGACAAACGG
CGGGCTTTCAAGGGTATGACCTTGTCCAAAAAGAGAAAAGATCGAATGGATGTGGATCAC
CGGATCGAAATGCTCACAGCACGTCTCGAGGAAGATGTGATTGACGAGGAGTCGGAAAAT
CTGACAGAGTTCCGCGAAATCCAGTTTTCCGTCTGGTTCGACATGTTCATGGAGTACGCG
CTGGCTCTAGCTCGTTACGAAGATACCCCAGCCGATTGCTACACGGTTCTCAACTACGCC
AAAGAAGCCAATGTGTTCCGCATGAACTCGGACCGTGTTGAATGCATGGACCTCGTTCAT
GTGGCCTGTTCTATCATTGCCAACGATTACAGAATCGCCAATGAGGAGACCAAGACTCTG
ATGAGAACCCTCAAGTTTTACAACGACACAATCCGACTGTTTTCCGCGGTTCTGCCATCT
GGAGCAGACGCCCAAGCCGTTTTCAACTCTACCAACAACCAAAAGTTCATCCTCAGATAC
ATCAAGGCCGTAGACTCGATAATTCTGGGCAAGGAGATTACCGGCCAGATGCGAGTCGAA
AATCGCGCCGATTACGCCGGAGTGCTGCACAAGGAAAACCCTCTACTGCTGACTCTTTAT
GGCCACGCTATGATTCTGGGTCGATCCTACGTATCAGCACTGACCTATCTTATGCGGGCA
CTCAAAGAGTCTCCTCAGGATCCCATGGTTCTGTTCACCATTGCCATTGCGCATGTTCAC
CGAGCCATTCAACGACAAACCAACAACCGACATTTGCAGATTGTCGAGGGTCTGTCGTTT
CTCACCCAGTATATGGACATTAGGGAAAACTCGGGCGATCACGAGTCGCAGGAAGGACAC
TTTAACATGGCCCGAATGGCTCACATGCTGGGTCTGACGGGATTGGCAGTGGAGAATTAC
AACAAGGTGTTAGAGTTTGAGGGTCTGGATGAGAGATATGACCTCAAGAGAGAGGCGGCG
TATAATCTGCAGTTGATTTATACCGTCAGTGGCAATGGTAAGTTGGCTCGCTGGGTGGTG
GATAAATATCTCACTGTTTAAGTGAGATGGGATGAGATGAGACGAGTTAGGGTATGGATG
GAGTTCTCCTCGACTCTGTTTTATAATCAATGTAATTTATTGTGTGATTTGGCCCTTGTG
ACCACTTG

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0B00528g_CDS-001

Protein length: 927 aa.
Product: Subunit of RNA polymerase III transcription initiation factor complex, putative

>YALI0B00528g_CDS-001 MNYDDLRDQFSDYEDDDDFDVGQERYESDGDGDGDELGDLDNLDALPKRLQEIVGGGIPG
GSGSASGKKKRGRGRVSIVDREPAPEVKMYLAQASECYINKQLDKAIELLGRAVQLDPKA
YQAFKLLVTIYDELGDADRALTANLAAAILNHRAKEDWLAAAERSHAIGGARMLDQAIYC
YSKVIQVDPGDESALTERAGLYMDKDMWKKAEQDLKRLLEMQPGDEAVVRTLGYVYTRQG
READAIELYEGILQERLESRAGENEVLQPFTFTQLNYLLDMYVRTESWGKVLIKGKAVAR
WLLGRADETYWDEHALETDAEFDERRKSVKRSQNRDPESYRLPVEIRSHICIARLKMGDA
NGLQEARHHLDMFLEEDSAVFADIFLTLGQAFLNANLYAEALDLLTPLVRHDADVVSQTD
LYLALASALHHLGHYEDAEQAYLTVSNIDPNNVDAMLGLAESYHFQERYDECTSIVDEIR
DLRAKQKREELEEEVGDGDEESGVVFVARQRPSTKPSVKEKELLERKATEACKEKFAALE
RQRAGLLQGNAVAVYEWMTIASELVDSFSSVRQFYPSDKRRAFKGMTLSKKRKDRMDVDH
RIEMLTARLEEDVIDEESENLTEFREIQFSVWFDMFMEYALALARYEDTPADCYTVLNYA
KEANVFRMNSDRVECMDLVHVACSIIANDYRIANEETKTLMRTLKFYNDTIRLFSAVLPS
GADAQAVFNSTNNQKFILRYIKAVDSIILGKEITGQMRVENRADYAGVLHKENPLLLTLY
GHAMILGRSYVSALTYLMRALKESPQDPMVLFTIAIAHVHRAIQRQTNNRHLQIVEGLSF
LTQYMDIRENSGDHESQEGHFNMARMAHMLGLTGLAVENYNKVLEFEGLDERYDLKREAA
YNLQLIYTVSGNGKLARWVVDKYLTV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG