1. Home
  2. Species & strains list
  3. Maudiozyma bulderi
  4. CLIB 596

Maudiozyma bulderi CLIB 596T


Strain details

Complete name: Maudiozyma bulderi CLIB 596T

Collection url: CLIB 596

Version

Added in GRYC: 2025-02-08
Last update: 2025-02-08


Quality

manual-curation RNASeq-curation go-FAnnoT


Assembly overview

Status contig
#contigs 30
Length 14,529,293 bp.
N50 911,116
%GC 33.13%
Bio-project PRJEB44438
External accession GCA_933962305.1
0*1061*1062*106KABU0_01SKABU0_02SKABU0_03SKABU0_04SKABU0_05SKABU0_06SKABU0_07SKABU0_08SKABU0_09SKABU0_10SKABU0_11SKABU0_12SKABU0_13SKABU0_14SKABU0_15SKABU0_16SKABU0_17SKABU0_18SKABU0_19SKABU0_20SKABU0_21SKABU0_22SKABU0_23SKABU0_24SKABU0_25SKABU0_26SKABU0_27SKABU0_28SKABU0_29SKABU0_30S

Genome annotation

The genome annotation of Maudiozyma bulderi CLIB 596 consists of 6702 annotated loci, including 5640 protein coding genes, 0 of them are pseudo-genes.

Seq. name Length %GC #Loci #Coding genes #pseudo-gene
KABU0_01S 1,960,349 32.9 888 775 0
KABU0_02S 1,604,610 32.63 731 653 0
KABU0_03S 1,227,139 32.56 552 476 0
KABU0_04S 1,039,024 33.01 479 416 0
KABU0_05S 941,512 32.83 420 376 0
KABU0_06S 911,116 33.16 444 369 0
KABU0_07S 600,300 33.39 293 244 0
KABU0_08S 579,737 32.7 272 237 0
KABU0_09S 565,733 33.64 275 224 0
KABU0_10S 524,824 33.4 244 177 0
KABU0_11S 521,712 33.19 244 211 0
KABU0_12S 461,926 33.1 211 191 0
KABU0_13S 435,181 33.68 200 170 0
KABU0_14S 419,816 35.11 194 157 0
KABU0_15S 371,538 32.36 165 117 0
KABU0_16S 284,691 33.48 138 104 0
KABU0_17S 275,915 33.63 124 93 0
KABU0_18S 258,910 33.83 107 83 0
KABU0_19S 245,834 36.4 114 75 0
KABU0_20S 232,511 33.64 114 82 0
KABU0_21S 220,191 32.51 115 93 0
KABU0_22S 218,197 33.93 95 92 0
KABU0_23S 196,564 31.87 93 75 0
KABU0_24S 132,970 32.56 61 58 0
KABU0_25S 126,611 33.72 67 46 0
KABU0_26S 70,586 32.75 19 15 0
KABU0_27S 41,956 34.08 23 14 0
KABU0_28S 24,987 35.36 5 5 0
KABU0_29S 21,560 30.44 9 6 0
KABU0_30S 13,293 32.89 6 6 0

Download

You can download sequence and/or annotation data by clicking on the following file logos.
You have two possibilities:

  • Separated files: to download a zipped file that contains one file per chromosome/scaffold,
  • Merged files: to download a zipped file that contains a single file for all the chromosome/scaffold of the strain.

The different types of data are:
  • Proteins: Multi-fasta file(s) of all the proteins from the CDS features. These files do not include translations from features that are annotated as pseudo-genes,
  • Loci: Multi-fasta file(s) of all the DNA sequences of all the annotated loci,
  • Chromosomes/Scaffolds/Contigs: (Multi-)fasta files of the chromosomes/scaffolds/contigs of the strain,
  • Annotation (EMBL): Complete genome annotations in EMBL format,
  • Annotation (GFF3): Annotations of all the transcripts in GFF3 format.


Proteins Loci contigs Annotations (EMBL) Annotations (GFF3)
Separated files All proteins in fasta All loci in fasta All chromosomes in fasta All chromosome annotations in embl All chromosome annotations in gff3
Merged files All proteins in fasta All loci in fasta All chromosomes in fasta All chromosome annotations in embl All chromosome annotations in gff3

References

No reference.

Do you confirm the deletion?

Be careful, this action cannot be undone.


Reported issues

No issue.