Lachancea thermotolerans CBS 6340T


Strain details

Complete name: Lachancea thermotolerans CBS 6340T

Collection url: CBS 6340

Version

Added in GRYC: 2025-02-16
Last update: 2025-02-16



Assembly overview

Status chromosome
#chromosomes 8
Length 10,392,862 bp.
N50 1,513,537
%GC 47.29%
Bio-project PRJNA12499
External accession GCF_000142805.1

Genome annotation

The genome annotation of Lachancea thermotolerans CBS 6340 consists of 5332 annotated loci, including 5090 protein coding genes, 0 of them are pseudo-genes.

Seq. name Length %GC #Loci #Coding genes #pseudo-gene
NC_013077 687,718 47.28 344 330 0
NC_013078 893,706 47.57 456 433 0
NC_013079 999,246 47.28 521 494 0
NC_013080 1,513,537 47.33 789 763 0
NC_013081 1,521,774 47.17 752 722 0
NC_013082 1,632,914 47.35 880 838 0
NC_013083 1,720,065 47.35 864 832 0
NC_013084 1,423,902 47.04 726 678 0

Download

You can download sequence and/or annotation data by clicking on the following file logos.
You have two possibilities:

  • Separated files: to download a zipped file that contains one file per chromosome/scaffold,
  • Merged files: to download a zipped file that contains a single file for all the chromosome/scaffold of the strain.

The different types of data are:
  • Proteins: Multi-fasta file(s) of all the proteins from the CDS features. These files do not include translations from features that are annotated as pseudo-genes,
  • Loci: Multi-fasta file(s) of all the DNA sequences of all the annotated loci,
  • Chromosomes/Scaffolds/Contigs: (Multi-)fasta files of the chromosomes/scaffolds/contigs of the strain,
  • Annotation (EMBL): Complete genome annotations in EMBL format,
  • Annotation (GFF3): Annotations of all the transcripts in GFF3 format.


Proteins Loci chromosomes Annotations (EMBL) Annotations (GFF3)
Separated files All proteins in fasta All loci in fasta All chromosomes in fasta All chromosome annotations in embl All chromosome annotations in gff3
Merged files All proteins in fasta All loci in fasta All chromosomes in fasta All chromosome annotations in embl All chromosome annotations in gff3

References

No reference.