YALI0E35156g - URC5

Overview

Description uniprot|Q6C3G2 Yarrowia lipolytica YALI0E35156g URC5 Urea carboxylase and allophanate hydrolase activities involved in uracile catabolism, putative
Locus type CDS
Gene name URC5
Locus tag YALI0E35156g

Location

Species Yarrowia lipolytica Positions 4201038..4206674
Strain CLIB 122 Strand Sense
Chromosome YALI0E Total length 5637 (nuc.)
Previous locus YALI0E35134t Next locus YALI0E35200g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E35156g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E35156gYALI0E35156g_mRNA-001YALI0E35156g_CDS-001

Nucleotide sequence

 

>YALI0E35156g
ATGAGCACATCAATCGGCTGGACTATTCCTGAATGGAAGGAGGCACAGACCAACTCGTCT
TACGAGGAGGGCCGACATCGATTGTTGGACCTTGTGGCCACCTTCAAGGACTATAAGCGT
GGAGATCCCGCGTGGATCACTCTTGCCTCAACAGAACTTATCAACAAGCAATGGAAGGAG
CTTCAACTGATGAAAAAGGACCCAGAGGTGAGTATGAGATATACAAAAATAGCATTCGAC
TTTATTCTCAGCAAAATTCAGCAATGATCTCTTGATTTGATCGAAGGATCTTTCCCACCA
TGCTGGAGTGGTCACAGCAGCTCCAAATCATTGGGTTGACCTAATGCCATCGCAACTGCT
TAGATTAAGGCGCTAACACAGTCCCTACCACTCTACGGAGTCCCTTTCGCTGTCAAGGAC
AGCATTGACGTGGCAGACTTTCCAACAACAGTTGCCTGCCCCGCCTACCTCTACGTTGCC
AAGGAAGACGCCACCACCGTCCGTCTCATCAAGGAAGCTGGAGGCATTGTTGTCGGCAAA
ACCAACCTGGATCAATTCGCTACGGGTCTGGTTGGAACCCGATCTCCCTACGGAAAGACC
CCCAACACCTTCTCCGACAAGCACGTGTCTGGTGGCTCTTCTTCTGGTTCCGCTTCAGTT
GTCGCCCGAGGCCTTGTTCCCTTCTCGCTCGGAAGTGACACCGCAGGATCAGGTCGAGTT
CCTGCCTCTCTCAACAATTTGATTGGTCTGAAGCCCTCCGCTGGCATCGTTTCCATGAAG
GGTGCGGTGCCTGCCTGCAAGACCATCGACTGCCTCTCAATCTTCTCTCTGGTGCTATCT
GATGCCCAGCTGGTGTTCAACATTACCGCCCACTACGATAAGGATGACTTCTACTCGCGA
AGTTTACCCCATCGACCTCTCAAGTCCTTTGGCCCCGCCCCTGTCTTTGCTGTCCCTGAG
AACCCTTTGTGGTTTGGTGATGAGCTCAATCCTGAGATGTTCGACAATGCCGTCGAGCAT
CTGCGACAACAGGGCGTCAAGGTGGTCAAGATTGACTTTAATCCTTTGTTTGATCTCGCC
AAGTGCCTCTACGAAGGTCCTTGGGTAGCTGAGCGATATGCTACCCTCAAGGATTTTATG
CAGAACCGAAAGGAAGATATGAACGAGACTGTGTACGGCATTATCAAACATGCAGAGACG
TTCACTGCTGCAGACGCCTTTTCTTACGAATACAAGCGACGGGCCATTGTGCGGAAGATT
GAGGAGATCTTCTCTTCAATTGATGGTCTGTTTGTGCCTACCTGTCCTCTATTCCCCACC
ATGGATTCTGTGGCCAAGGAGCCTGTCACTGTCAACGCCAATCAGGGTACTTACACCAAC
TTTGTCAACCTTGCTGATCTCTCCGCACTGGCAATTCCTGCTGGTTTCCGAAAGGACGGC
CTTCCATTTGGAATCACACTCATCTCACAAAAGTTCAACGACCATGCTCTGCTGGACATG
GCTCAGAAGTTCCTATCTACTTCTCGACCCCTGGGTGCCTTACCCAAGGATCAGTTCACT
GCTAAGAAGGGTGATGCTCTGGCCTCCTCCATTGTTGACAATATGCCTCGAACCATTCCC
CTGGCTGTGGTAGGAGCCCATATGACTGGCATGCCTCTCAACTGGCAGCTTCAAAAGGTC
GAGGCGACTCTTGCCCGACGAACCCAGACCGCTAAAAACTACCGACTTTACGCGTTGGCC
AACACCGTTCCTTCCAAGCCAGGTCTTCGACGAGTGCTACCTTCCGACACTACTCTTCGA
GGCGAGGCTATTGAGGTTGAGGTTTGGGATGTTCCTTACCAAACCTTTGGTGAGTTCGTC
TCCATGATCCCTCATCCTCTTGGTATTGGAACCATTGAGCTTGCCGACGGCAAGTGGGTC
AAGGGATTCATTTGCGAGCAGCAAGGATATGACGACGCCGAGGACATTACCAAATTTGGA
GGCTGGAGAGCATTCAAGGCTGAAATTAAGCTGAAATCGGAGTCTAAGCCCTTTGAGACG
GTCCTGGTGGCCAACCGAGGTGAGATTGCTGTCCGACTCATCAAGACTCTGCGAAAGATG
GGAATTAGAGCTATTGCGGTCTTCTCCGAGCCCGACAGATTTGCTCAGCACGTCCTTGAT
GCTGATGACTCCGTTTCTCTAGAGGGTACCACTGCTGCCGAGACCTATTTATCCATCCCC
AAGATCATTGCTGCTTGCAAGCAGACAGGCGCTGAAGCCATTCTTCCTGGCTACGGTTTC
CTGTCTGAGAATGCCGACTTCTCTGACGCTTGTGAGGAGGCTGGCATTGTCTTCGTTGGT
CCCACTGGTGACTCCATCCGAAAGCTTGGTCTCAAGCACTCTGCTCGAGAGATTGCCCTC
GCCTCTGACGTGCCTCTTGTTCCCGGCACTGGTCTGATCGAGACGGTTGCCGAGGCTGAA
GAGGCTGCCAAGAAGCTCGAGTACCCCCTGATGATCAAAAGCACCGCTGGTGGAGGTGGT
ATTGGTTTGCAGAAGGTCGACAAGCCCGAAGATCTCAAGCGGGCGTTCGATACCGTTAAG
CACCAGGGTAAGTCTTTCTTTGGAGACGATGGTGTCTTTATGGAGCGATTTGTAGAGAAA
GCTCGACACGTGGAAGTTCAGATTCTCGGTGATGGTAAGGGTAATGCCATCGCTATTGGT
GAGAGAGACTGTTCTCTTCAGCGACGAAACCAAAAGGTAATTGAGGAGACTCCCGCCCCT
AACTTCCCTGCCGAGACTCGAACGCGGATGATGAATGCCTCCGAGATGCTGGCCAAGAAT
CTTAACTATCGAGGGGCAGGCACTGTGGAGTTCATTTTCGACGAGAAGCGAAACGAGTTC
TACTTCCTAGAAGTCAACGCTCGTCTGCAGGTCGAACATCCCATCACCGAGTACGTCACT
GGTCTGGATCTTGTCGAGTGGATGATTCTTATTGGTGCTGGTAAGGCTCCCGACTTTGAA
GCGCAACGTGCTAAGACCCCCAAGGGTGCTTCTATCGAGGCTCGTCTCTACGCCGAGAAC
CCCATCAAGGATTTTGTGCCGTCTCCGGGCCAGCTCACGGACGTGCAGTTTCCTACTGAC
GCTCGAGTCGACACCTGGGTCTCCCGTGGAACTAAGGTCTCAGCCGAGTACGATCCTACG
CTTGCCAAAATTATTGTTTATGGTACTGACCGAGCTGACGCTCTGCAGAAGCTTCAGAAA
GCTCTGGAAGAGACTGTGGTTGCCGGGGTGACTACCAACCTCGATTACCTCAAGTCCATT
GTCGGATCTGAGATGTTTGCCGAGGCTAAAGTCTCCACCCAAGTGTTGGATTCCTACAAT
TACCATCCCAACGCCATTGAGATTACTGCGCCCGGCTCCTATACAACAGTTCAGGACTAT
CCTGGCCGAACCAAGTTGTGGCACATTGGTGTTCCCCCTTCTGGGCCTATGGACACATAC
GCCTTCCGAGTGGCCAACCAGATTGTTGGTAACAACCCTAAGGCTCCTGCCATTGAGGCT
ACTCTTGTAGGTCCCTCTATTCTGTTCCACAGCGACACCGTCATTGCCGTCACCGGTGGA
TCTGCTGAGGCCACCCTGAACGGCAATCCTATCGAGTTTTGGAAGCCAGTGAATGTCAAA
GCTGGACAGACTCTGGCTACTGGTCGTCTAACCTCTGGATGTCGACTGTACATTGCCATT
CGAAAAGGCTTATCCATCCCCGAGTACCTTGGCTCTCGATCCACCTTTGCTTTCGGTAAC
CTTGGAGGCTTCAACGGTCGGACTCTCAAGTTTGGCGACGTCATCTTCATGAATGATCCT
GAGCTCCCTTCTTGTTCCATTCCTGCTCCCATTTCCGAGCCTGCTCCTGCATCAGCTGAT
ATGATCCCCCAATACGGAAACTCCTGGACTGTTGGTGTTACCTGTGGCCCTCACGGTTCG
CCCGACTTCTTTGCCCAGGGTTGGATGGATACCTTCTTCGATTCCAAGTGGAAGATTCAC
TACAACTCCAACCGATTTGGTGTTCGATTGATTGGCCCTAAGCCGGAGTGGGCTCGAAAG
GACGGTGGAGAGGCCGGTTTGCATCCCTCCAACCAGCATGACTACGTCTACTCTCTGGGG
GCTGTTAACTTCACTGGTGACGAGCCTGTCATTCTGACATGCGACGGTCCTTCTCTTGGT
GGTTTTGTTTGTGCTGCTGTTGTTGCGGAGGCTGAGCTGTGGAAGATTGGCCAGGTGAAG
CCGGGAGACACTGTGCAGTTTGTACCCATGTCCATCGACTCTGCTCGACAGCTTAAAAAG
GCACAGGACAGAACCATCACCAACCTGTGTGGTTCTTCGTATGAGTCTGTTGATGCTCTC
CTTGCCCTTGAGGACTATGAGAACCCCGTCATATACACTCTTCCTGCCTCAACGTCCACT
CCCCGTGTCGTCTATCGACAAGCTGGAGACCGGTACATTTTGGTTGAGTACGGCGACAAC
AGCATGGACATTAACATATCATACCGAATCCACCGACTCATCGAGGAGGTTCAGCAGTCC
ATAAAGGGCATTGTCGAAATGTCTCGAGGGGTTCGTTCCGTTCTGATCGAGTTCCATGCT
TCTGCCTCTCGATCCACTCTCATGAAAGCCCTGGTTGATTTTGAGAAACGACTCCAGATT
GTCGAGACCTGGCAGGTGCCCTCTCGAATCATCCGACTTCCCATGTGTTTTGAGGATTCC
AAGACCCTCGAGGCAGTCAAGCGATATCGGGAGACCATTCGGTCAAAGGCTCCGTGGCTG
CCCAACAACGTCGACTTCATTCAACGCGTCAACAAATTCTCCGACAGATCCCAGGTCAGA
GACATTCTCTACACTGCCCGATACTTGGTCCTGGGTCTTGGAGATGTGTTCCTCGGTGCT
CCTTGCACTGTGCCTCTTGATCCCCGACACAGACTGCTTGGAACCAAGTACAATCCCTCT
CGGACCTACACTGCCAACGGTACTGTCGGTATTGGAGGCATGTACATGGCTATTTACACC
ATGGACTCCCCTGGTGGTTACCAGCTGGTTGGTCGAACCATCCCCATCTGGGACAAGCTG
TCTCTTGGTCAGGAACGACCGTGGTTAATGTCTCCCTTTGACCAGATCGAGTACTACCCC
GTTAATGAGGAGGAGCTCGACAACATCACCACCGAGGTGGAGAATGGTCGATACGCTGTG
GAGATAGAACAATCGGTCTTTGACTTCGGCGTTTACTCTGCGTGGCTTAAGGACAACTCC
GAGTCCATCGATGCCCACATGGCTTCTCAGGCCGAGGGTCTGGACGAATTTACCAACCTG
ATCAAGGTCGCCAACGAGGATCTGTCCTATGGTAAGGCTGTAGCCCCCAAGGAAGAGACC
CCGCTGTCTGCGTCAGCCGTCCAGGTCTTCTCGGAGGTCACTGGTCGGTTCTGGAAAAGT
TTGGTTGCTGTTGGGGATACCGTTGACAAGGGTCAGGCTATCCTTGTGGTGGAGGCCATG
AAGACCGAGATGATCATCAACACTCCGACGGCAGGAAAGGTTGTCAAGTTGTACAACATC
AACGGAGATATGGTGGATACTGGGGATTGTGTGGCTGTTATTGAGCCAGTTGTTTAA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E35156g_CDS-001

Protein length: 1821 aa.
Product: Urea carboxylase and allophanate hydrolase activities involved in uracile catabolism, putative
Gene: URC5

>YALI0E35156g_CDS-001 MSTSIGWTIPEWKEAQTNSSYEEGRHRLLDLVATFKDYKRGDPAWITLASTELINKQWKE
LQLMKKDPESLPLYGVPFAVKDSIDVADFPTTVACPAYLYVAKEDATTVRLIKEAGGIVV
GKTNLDQFATGLVGTRSPYGKTPNTFSDKHVSGGSSSGSASVVARGLVPFSLGSDTAGSG
RVPASLNNLIGLKPSAGIVSMKGAVPACKTIDCLSIFSLVLSDAQLVFNITAHYDKDDFY
SRSLPHRPLKSFGPAPVFAVPENPLWFGDELNPEMFDNAVEHLRQQGVKVVKIDFNPLFD
LAKCLYEGPWVAERYATLKDFMQNRKEDMNETVYGIIKHAETFTAADAFSYEYKRRAIVR
KIEEIFSSIDGLFVPTCPLFPTMDSVAKEPVTVNANQGTYTNFVNLADLSALAIPAGFRK
DGLPFGITLISQKFNDHALLDMAQKFLSTSRPLGALPKDQFTAKKGDALASSIVDNMPRT
IPLAVVGAHMTGMPLNWQLQKVEATLARRTQTAKNYRLYALANTVPSKPGLRRVLPSDTT
LRGEAIEVEVWDVPYQTFGEFVSMIPHPLGIGTIELADGKWVKGFICEQQGYDDAEDITK
FGGWRAFKAEIKLKSESKPFETVLVANRGEIAVRLIKTLRKMGIRAIAVFSEPDRFAQHV
LDADDSVSLEGTTAAETYLSIPKIIAACKQTGAEAILPGYGFLSENADFSDACEEAGIVF
VGPTGDSIRKLGLKHSAREIALASDVPLVPGTGLIETVAEAEEAAKKLEYPLMIKSTAGG
GGIGLQKVDKPEDLKRAFDTVKHQGKSFFGDDGVFMERFVEKARHVEVQILGDGKGNAIA
IGERDCSLQRRNQKVIEETPAPNFPAETRTRMMNASEMLAKNLNYRGAGTVEFIFDEKRN
EFYFLEVNARLQVEHPITEYVTGLDLVEWMILIGAGKAPDFEAQRAKTPKGASIEARLYA
ENPIKDFVPSPGQLTDVQFPTDARVDTWVSRGTKVSAEYDPTLAKIIVYGTDRADALQKL
QKALEETVVAGVTTNLDYLKSIVGSEMFAEAKVSTQVLDSYNYHPNAIEITAPGSYTTVQ
DYPGRTKLWHIGVPPSGPMDTYAFRVANQIVGNNPKAPAIEATLVGPSILFHSDTVIAVT
GGSAEATLNGNPIEFWKPVNVKAGQTLATGRLTSGCRLYIAIRKGLSIPEYLGSRSTFAF
GNLGGFNGRTLKFGDVIFMNDPELPSCSIPAPISEPAPASADMIPQYGNSWTVGVTCGPH
GSPDFFAQGWMDTFFDSKWKIHYNSNRFGVRLIGPKPEWARKDGGEAGLHPSNQHDYVYS
LGAVNFTGDEPVILTCDGPSLGGFVCAAVVAEAELWKIGQVKPGDTVQFVPMSIDSARQL
KKAQDRTITNLCGSSYESVDALLALEDYENPVIYTLPASTSTPRVVYRQAGDRYILVEYG
DNSMDINISYRIHRLIEEVQQSIKGIVEMSRGVRSVLIEFHASASRSTLMKALVDFEKRL
QIVETWQVPSRIIRLPMCFEDSKTLEAVKRYRETIRSKAPWLPNNVDFIQRVNKFSDRSQ
VRDILYTARYLVLGLGDVFLGAPCTVPLDPRHRLLGTKYNPSRTYTANGTVGIGGMYMAI
YTMDSPGGYQLVGRTIPIWDKLSLGQERPWLMSPFDQIEYYPVNEEELDNITTEVENGRY
AVEIEQSVFDFGVYSAWLKDNSESIDAHMASQAEGLDEFTNLIKVANEDLSYGKAVAPKE
ETPLSASAVQVFSEVTGRFWKSLVAVGDTVDKGQAILVVEAMKTEMIINTPTAGKVVKLY
NINGDMVDTGDCVAVIEPVV*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG