YALI0E34111g

Overview

Description similar to uniprot|P06787 Saccharomyces cerevisiae CMD1 CaM YBR109C Calmodulin
Locus type CDS
Locus tag YALI0E34111g

Location

Species Yarrowia lipolytica Positions 4052544..4053588
Strain CLIB 122 Strand Antisense
Chromosome YALI0E Total length 1045 (nuc.)
Previous locus YALI0E34089g Next locus YALI0E34133g

Structure and hierarchy

Here is a representation of the structure of the locus YALI0E34111g oriented from its 5' end (left) to its 3' end (right). In accordance with the decomposition of feature levels, this locus consists of :

  • The whole locus region.
  • Transcribed regions (translated part).
  • Transcribed regions (untranslated part).
  • Intronic regions.
  • Coding regions (CDS).

By clicking on the different fragments, you can show/hide the nucleotide sequence that corresponds to the selected region/feature.


YALI0E34111gYALI0E34111g_mRNA-001YALI0E34111g_CDS-001

Nucleotide sequence

 

>YALI0E34111g
GGTAAGTACGATGACGACGAGAAAAAGCAGGGGTAACCCTTACGTGATAATATTCTGCAC
TCGGAAGTGAGGGCCTGCTTTTATTGTGCCACGTGCTAGTGCGGGTCTCTCCCAAGAAAC
ACCCTCTGACACGTGGCATACAAGCATCCCTTAAAAAGACGAGACAATCCGGTTGCGTCA
CGTTCATTCCCTCGATCGAAAATACCCTCGACCGAACCGCAATGCTAACCAAGATGTCTG
ACCAGCTGACCGAAGACCAGGTTGCCGAATTCCGAGAGGCTTTCTCCCTGTTTGACAAGA
ACAATGACGGTAAAATCACCACCAAGGAGCTTGGTACCGTGATGCGAAGTCTGGGCCAGA
ACCCCAGCGAGTCCGAGCTCGCCGACATGATCAACGAGGTCGACGCCAACAACGACGGCA
CCATTGACTTCGCCGAGTTCCTCACCATGATGGCTCGAAAGATGAAGGATACCGACTCCG
AGGAGGAAATCAGAGAGGCATTCAAGGTCTTTGACCGGGATAACAACGGCTTCATCTCCG
CCCAGGAGCTCCGACACGTCATGACCTCCATTGGTGAGAAGCTCACCGATGAGGAGGTTG
ATATGATGATCAAGGAGGCTGATGCCAACGGTGATGGCCGAATCGACTACAACGAGTTTG
TTCAGCTGCTGGTGAGTTCTACTATTACATGATGTCGGGATAATTCTGGCTCATTCTCGC
GCGCACGTGGGACCCTAAGGCGCTCACCCGTGCGCAGCGGGCCCTTCTTTGCTACCGGCT
GTGTCCGTTTTTCCCTGCTGCTTGTTGTTTACACAGCCCGTGTGGTGCACATTTTGAGCG
CGTTTCTGCACTGGCTGAGTCAATATTGTTATCAGTGGAAAAACGGTCCTGTAGCGCTAC
ACGCGAGCTAATTATTTGTGTGCGTGTGTTACAGAGCAAAGGATCCGCCGTATCGCCTTT
AATTGCACTTCCATACTAACCCAGTCTGCTAAATAAGCGCCCTTTGAGTCTTGAAATAGA
GCATGTGATTTTTTTCTGTTGTACA

Legend

Locus sequence
Up/downstream sequence

Edit sequence


Translation(s)

YALI0E34111g_CDS-001

Protein length: 150 aa.
Product: Calmodulin, putative

>YALI0E34111g_CDS-001 MSDQLTEDQVAEFREAFSLFDKNNDGKITTKELGTVMRSLGQNPSESELADMINEVDANN
DGTIDFAEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAQELRHVMTSIGEKLTDE
EVDMMIKEADANGDGRIDYNEFVQLLSAK*


Neighborhood

Browse the locus neighborhood with JBrowse:


References

There are no reference.

ATG